Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893039

Identifier: 51893039

GI number: 51893039

Start: 2041693

End: 2042313

Strand: Reverse

Name: 51893039

Synonym: STH1901

Alternate gene names: NA

Gene position: 2042313-2041693 (Counterclockwise)

Preceding gene: 51893040

Following gene: 51893038

Centisome position: 57.27

GC content: 66.67

Gene sequence:

>621_bases
GTGGAAGAGTGTTTATACTGTTACCAAACCCATATGGGCGTCACCACTTCTAAGGGAGAGGGATGCACCATGAATATGTC
GGTCCGTAAGATGGCGGTGGCCGGCTTGCTCGGCGCCGTCTCCGCTGCGCTGGGTTTGGTTCCGGGGCTCGGGTTCATCC
CGTTCCCCACCGGTCAGGCGGTCACGATCATGCAGATCCCGGTCGTGCTGGCCGCCGTCGCCGAAGGTCCCGCCGTGGGC
CTGTTCGTCGGCCTGATCTTCGGCCTCACCTCGTTCCTGCGGGCGACCAACCCGGCCTTCGCTGATCCGCTGGTCTCGAT
CCTGCCCCGTCTGTTCATCGGCGTGTTCGCGGCGTACGCATTCGCCGCCCTCCGCCGCCGGAACCTGACCCTGGCCCTGG
CCGCCGCCGGCGTGGTGGGCACCCTCACCAACACGGGGTTGGTGCTGGGCATGATCCTGCTCCGGGGATACTGGCCACCC
GAGGTGGTCTGGACGGTGGCCGTCACCCACGCCCCGCTGGAGCTGCTGGTGGGCACCTTTGCCGTTGTGACGGTGGGTCT
GGCCCTGCACCGGGCGGGCTATATCCGGGTCGCTTACCGGCCTTCCGGTCAGAACTCCTAG

Upstream 100 bases:

>100_bases
CACGTACCCGATGGGCCACGCGATCTCGCCGGAGGAGCTGGCCGACATGGTTACCTGGGTCGAGCAGGGGCTTTCGCGCG
CGATGGCCCCGTGACAACCG

Downstream 100 bases:

>100_bases
AGCGCTTATGGCGGCCGCCCTCCGCGGGGAGGGCGGCCTTTCGAACATCGCGGAAAGGACGTGCTGCCCATGACGGATCC
GGTTTGGCTGAGCGGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQAVTIMQIPVVLAAVAEGPAVG
LFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYAFAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPP
EVVWTVAVTHAPLELLVGTFAVVTVGLALHRAGYIRVAYRPSGQNS

Sequences:

>Translated_206_residues
MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQAVTIMQIPVVLAAVAEGPAVG
LFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYAFAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPP
EVVWTVAVTHAPLELLVGTFAVVTVGLALHRAGYIRVAYRPSGQNS
>Mature_206_residues
MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQAVTIMQIPVVLAAVAEGPAVG
LFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYAFAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPP
EVVWTVAVTHAPLELLVGTFAVVTVGLALHRAGYIRVAYRPSGQNS

Specific function: Unknown

COG id: COG4684

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21519; Mature: 21519

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQA
CCHHHHHHHHHCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VTIMQIPVVLAAVAEGPAVGLFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYA
EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPPEVVWTVAVTHAPLELLVGTF
HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHHHHHHHHHHHH
AVVTVGLALHRAGYIRVAYRPSGQNS
HHHHHHHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure
MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQA
CCHHHHHHHHHCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VTIMQIPVVLAAVAEGPAVGLFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYA
EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPPEVVWTVAVTHAPLELLVGTF
HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHHHHHHHHHHHH
AVVTVGLALHRAGYIRVAYRPSGQNS
HHHHHHHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA