| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893037
Identifier: 51893037
GI number: 51893037
Start: 2040204
End: 2040533
Strand: Reverse
Name: 51893037
Synonym: STH1899
Alternate gene names: NA
Gene position: 2040533-2040204 (Counterclockwise)
Preceding gene: 51893038
Following gene: 51893036
Centisome position: 57.22
GC content: 71.52
Gene sequence:
>330_bases ATGGATGACGGCTTTGCGGCCAAGCTGCTCTCCAACTTCCTGATCGCCCTGGGCGTGACCCTGGGCGGCTCGCTCTCGGG CGCCGCCGCATCGCTGCTGTCCGGCGGCCACCCGCTCGACCGGCTCCGCTACCTGTCAGAAGACCTGCGGCTCTGGGGCA TCCTGGTGGCCGTGAGCGGCTCCTTCGAGCCGCTCCGCACCCTGGAGCAGGGGCTCCTGTTCGGGCAGGGCCGCGCCCTG GTCCGGCAGGTGGTGGCCCTGGTGGTCGCCATGGCCGGCGCCAACGTGGCCTACTTCCTTATCCAGACCGTGGCGGGGCG GCGGCTGTGA
Upstream 100 bases:
>100_bases GTGTCGTCCAACCGGGTGGACGAGCCGGCGGGCGCCGCACGCCTCCTGGTTCTGGACTCGTCCCCCGGGGCGTACTCTCC CCCCAGAGGGGGATGGGACG
Downstream 100 bases:
>100_bases GCCGGTGGCAGCGTGCGCTGCCCCTGCTGGCCTCGTTCGCGATGGGCTTTGCCGTGGCGATCTGGCTGCTGCCCGTCATG GCCGGGCCGACGGTGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSGSFEPLRTLEQGLLFGQGRAL VRQVVALVVAMAGANVAYFLIQTVAGRRL
Sequences:
>Translated_109_residues MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSGSFEPLRTLEQGLLFGQGRAL VRQVVALVVAMAGANVAYFLIQTVAGRRL >Mature_109_residues MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSGSFEPLRTLEQGLLFGQGRAL VRQVVALVVAMAGANVAYFLIQTVAGRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11441; Mature: 11441
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC SFEPLRTLEQGLLFGQGRALVRQVVALVVAMAGANVAYFLIQTVAGRRL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC SFEPLRTLEQGLLFGQGRALVRQVVALVVAMAGANVAYFLIQTVAGRRL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA