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The map label for this gene is ychJ [C]

Identifier: 51893022

GI number: 51893022

Start: 2025451

End: 2025927

Strand: Reverse

Name: ychJ [C]

Synonym: STH1884

Alternate gene names: 51893022

Gene position: 2025927-2025451 (Counterclockwise)

Preceding gene: 51893023

Following gene: 51893021

Centisome position: 56.81

GC content: 64.57

Gene sequence:

>477_bases
GTGGACCTGTTGCAGAAAGTCGGACGGAACGACTCCTGCCCCTGCGGCAGCGGCAGGAAGTATAAGACCTGCTGTGGCCT
CTACCATGCCCGAATCCAGTACCCGGACACCGTGGAGAGCTTGATCCGGAGCCGCTTCACGGCCTATGCCATCGGCGACG
TCGACTACCTCTGGCGCACGACCCATCCCGACAACCCGGCACGGGCGGGCAAGACCGAGGCCCAGTTCAAGCGGGAGACG
CTGCTCTATTGCTCCAAAGTGGATTTCACCCGGCTGGTCATCCACCAGACGGAGTCGGAGGACGAGAACGGGATCTCCCG
CGGCACGCTGACGGCGTGGTTCCGCATTCCCGGACGGCCCGAGGACTCGTTCACCGAACGGTCGGAGTTCAAGCGGGAGG
ACGGCCGGCTGCTTTACCTCAACGGCACCGAACTCGAATCCCCGCCCGCTCAACAGGCGCAGGGCGCCGATGACTGA

Upstream 100 bases:

>100_bases
ATTACGGCTGCTGGATACTTGACGGACATACTATACTGGAATACGTGCGGGTGCGCGTGCGCGCCCGGCTCCATAGGCAC
TCGTCAACAGTAACTGTGAG

Downstream 100 bases:

>100_bases
ACGTCCGCCCGGGCCGGCAGGCGCAGTGGCCAGGCGACCGATCGCGACCTCGCCGGCGGGCGCCGTGGCCAGGCGGCCGA
TCGCGACCTCGCCGGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDLLQKVGRNDSCPCGSGRKYKTCCGLYHARIQYPDTVESLIRSRFTAYAIGDVDYLWRTTHPDNPARAGKTEAQFKRET
LLYCSKVDFTRLVIHQTESEDENGISRGTLTAWFRIPGRPEDSFTERSEFKREDGRLLYLNGTELESPPAQQAQGADD

Sequences:

>Translated_158_residues
MDLLQKVGRNDSCPCGSGRKYKTCCGLYHARIQYPDTVESLIRSRFTAYAIGDVDYLWRTTHPDNPARAGKTEAQFKRET
LLYCSKVDFTRLVIHQTESEDENGISRGTLTAWFRIPGRPEDSFTERSEFKREDGRLLYLNGTELESPPAQQAQGADD
>Mature_158_residues
MDLLQKVGRNDSCPCGSGRKYKTCCGLYHARIQYPDTVESLIRSRFTAYAIGDVDYLWRTTHPDNPARAGKTEAQFKRET
LLYCSKVDFTRLVIHQTESEDENGISRGTLTAWFRIPGRPEDSFTERSEFKREDGRLLYLNGTELESPPAQQAQGADD

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=131, Percent_Identity=30.5343511450382, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18001; Mature: 18001

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLQKVGRNDSCPCGSGRKYKTCCGLYHARIQYPDTVESLIRSRFTAYAIGDVDYLWRT
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCHHEEEEC
THPDNPARAGKTEAQFKRETLLYCSKVDFTRLVIHQTESEDENGISRGTLTAWFRIPGRP
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC
EDSFTERSEFKREDGRLLYLNGTELESPPAQQAQGADD
CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLLQKVGRNDSCPCGSGRKYKTCCGLYHARIQYPDTVESLIRSRFTAYAIGDVDYLWRT
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCHHEEEEC
THPDNPARAGKTEAQFKRETLLYCSKVDFTRLVIHQTESEDENGISRGTLTAWFRIPGRP
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC
EDSFTERSEFKREDGRLLYLNGTELESPPAQQAQGADD
CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA