| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is ald [H]
Identifier: 51892960
GI number: 51892960
Start: 1967018
End: 1968136
Strand: Reverse
Name: ald [H]
Synonym: STH1822
Alternate gene names: 51892960
Gene position: 1968136-1967018 (Counterclockwise)
Preceding gene: 51892961
Following gene: 51892959
Centisome position: 55.19
GC content: 68.36
Gene sequence:
>1119_bases GTGAGGGTTGGCGTAGTGCGCGAGCTGAAGGCCTACGAGAACCGGGTGGCCATGACCCCCGCGGGCGTCATGGCGATGGT CAGGGCCGGCCATGAGGTGTACGTGGAGCACGATGCCGGCAGGGGCTCCGGGTTCGACGACTCGGAGTACGTCGCCGCGG GCGCCAGGATCCTGCCCAGCAATGAGGACGTCTGGGCCACCGCCGACATGATCGTCAAGGTGAAAGAGCCGCTGCCGCCC GAGTACGATCTCATGCGTGAGGGCCAGATCATCTTCACCTACCTGCACCTGGCCGCCGAACCGGAGCTGACCCGGAAGCT GATCGAGCGGAAGAGCATCGCCATCGCCTACGAGACGGTGCAACCGGCCGACCGGTCCCTGCCGCTCTTGACGCCCATGT CCGAGGTGGCCGGCCGCATGGCCGTCCAGATCGGCGCCCACTACCTGGAGAAGGCCCACGGCGGGCGGGGTGTGCTGCTG GGCGGCGTGCCCGGCGTCGCCCCCGGCCGGGTGGCGATCATCGGTGGCGGCACCGTCGGCACCAATGCGGCGAAGATCGC CCTGGGGATGGGCGCGCACGTCACCATCCTGGACATCAACGCCGATCGGCTGCGCTACCTGGACGACATCTTCGGCTCCC GGGTGGAGACGCGGATCTCCAACGAGTTCGAAATTGCCAATGCCGTGGCGCAGGCCGACCTGGTCATCGGGGCGGTGCTG ATCCCCGGCGCCAAGGCGCCGAAGCTGGTAACGGCGGAGATGGTCAAGCGGATGGCCCCGGGTTCCGTCATCGTGGATGT GGCCATCGACCAGGGCGGGTCGGTGGAGACCATCGACCGGGTGACGACCCACCAGGATCCCGTCTACGAGCGGTTCGGCG TCGTTCACTACGCCGTCGCCAACATCCCTGGCGCGGTGCCCCGGACCTCCACCTGGGCTCTGACCAACGTGACGCTGCCT TATGCCCTGAAGCTGGCCAACCTGGGCTGGAAGGAGGCGCTGCGTCAGGATCCGGCGCTGGCGAAGGGCGCCAACGTGGT CAGCGGCCACGTCACCTACCCGGCGGTCGCCGAGGCCCACGGGCTGGAGTACGTGGAGCTGGACAACGTGCTCAGGTAG
Upstream 100 bases:
>100_bases ATGGGATAATTCGTAAGAGAGTCGGGCTTGCATGGTTTCACCGGTGAAACCACCATCTCACTACTGGCGCGGCGCGCCGA ACGCGGAAGGAGCGAGAGCA
Downstream 100 bases:
>100_bases GCCGCAGGAGGCGGAGGACGGCCCCGCATCGGACTGATGCGGGGCCCTTGCTATTGGTTGAAAGCAGGGCGGGGAGGGGG GCATAACCCGGCGCCGGTCG
Product: alanine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRVGVVRELKAYENRVAMTPAGVMAMVRAGHEVYVEHDAGRGSGFDDSEYVAAGARILPSNEDVWATADMIVKVKEPLPP EYDLMREGQIIFTYLHLAAEPELTRKLIERKSIAIAYETVQPADRSLPLLTPMSEVAGRMAVQIGAHYLEKAHGGRGVLL GGVPGVAPGRVAIIGGGTVGTNAAKIALGMGAHVTILDINADRLRYLDDIFGSRVETRISNEFEIANAVAQADLVIGAVL IPGAKAPKLVTAEMVKRMAPGSVIVDVAIDQGGSVETIDRVTTHQDPVYERFGVVHYAVANIPGAVPRTSTWALTNVTLP YALKLANLGWKEALRQDPALAKGANVVSGHVTYPAVAEAHGLEYVELDNVLR
Sequences:
>Translated_372_residues MRVGVVRELKAYENRVAMTPAGVMAMVRAGHEVYVEHDAGRGSGFDDSEYVAAGARILPSNEDVWATADMIVKVKEPLPP EYDLMREGQIIFTYLHLAAEPELTRKLIERKSIAIAYETVQPADRSLPLLTPMSEVAGRMAVQIGAHYLEKAHGGRGVLL GGVPGVAPGRVAIIGGGTVGTNAAKIALGMGAHVTILDINADRLRYLDDIFGSRVETRISNEFEIANAVAQADLVIGAVL IPGAKAPKLVTAEMVKRMAPGSVIVDVAIDQGGSVETIDRVTTHQDPVYERFGVVHYAVANIPGAVPRTSTWALTNVTLP YALKLANLGWKEALRQDPALAKGANVVSGHVTYPAVAEAHGLEYVELDNVLR >Mature_372_residues MRVGVVRELKAYENRVAMTPAGVMAMVRAGHEVYVEHDAGRGSGFDDSEYVAAGARILPSNEDVWATADMIVKVKEPLPP EYDLMREGQIIFTYLHLAAEPELTRKLIERKSIAIAYETVQPADRSLPLLTPMSEVAGRMAVQIGAHYLEKAHGGRGVLL GGVPGVAPGRVAIIGGGTVGTNAAKIALGMGAHVTILDINADRLRYLDDIFGSRVETRISNEFEIANAVAQADLVIGAVL IPGAKAPKLVTAEMVKRMAPGSVIVDVAIDQGGSVETIDRVTTHQDPVYERFGVVHYAVANIPGAVPRTSTWALTNVTLP YALKLANLGWKEALRQDPALAKGANVVSGHVTYPAVAEAHGLEYVELDNVLR
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=347, Percent_Identity=31.700288184438, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI122939153, Length=347, Percent_Identity=31.700288184438, Blast_Score=147, Evalue=1e-35, Organism=Escherichia coli, GI1787887, Length=383, Percent_Identity=32.6370757180157, Blast_Score=147, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17550456, Length=348, Percent_Identity=30.1724137931034, Blast_Score=144, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 39777; Mature: 39777
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGVVRELKAYENRVAMTPAGVMAMVRAGHEVYVEHDAGRGSGFDDSEYVAAGARILPS CCCCHHHHHHHHHCEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCEECCC NEDVWATADMIVKVKEPLPPEYDLMREGQIIFTYLHLAAEPELTRKLIERKSIAIAYETV CCCEEEEEEEEEEECCCCCCCHHHHCCCCEEEEEEEHHCCHHHHHHHHHHCCEEEEEEEC QPADRSLPLLTPMSEVAGRMAVQIGAHYLEKAHGGRGVLLGGVPGVAPGRVAIIGGGTVG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCC TNAAKIALGMGAHVTILDINADRLRYLDDIFGSRVETRISNEFEIANAVAQADLVIGAVL CCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHEEEEE IPGAKAPKLVTAEMVKRMAPGSVIVDVAIDQGGSVETIDRVTTHQDPVYERFGVVHYAVA ECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH NIPGAVPRTSTWALTNVTLPYALKLANLGWKEALRQDPALAKGANVVSGHVTYPAVAEAH CCCCCCCCCCCEEEEEECHHHHEEECCCCHHHHHHCCCCHHCCCCEEECCCCCCCHHHHC GLEYVELDNVLR CCEEEEHHHHCC >Mature Secondary Structure MRVGVVRELKAYENRVAMTPAGVMAMVRAGHEVYVEHDAGRGSGFDDSEYVAAGARILPS CCCCHHHHHHHHHCEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCEECCC NEDVWATADMIVKVKEPLPPEYDLMREGQIIFTYLHLAAEPELTRKLIERKSIAIAYETV CCCEEEEEEEEEEECCCCCCCHHHHCCCCEEEEEEEHHCCHHHHHHHHHHCCEEEEEEEC QPADRSLPLLTPMSEVAGRMAVQIGAHYLEKAHGGRGVLLGGVPGVAPGRVAIIGGGTVG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCC TNAAKIALGMGAHVTILDINADRLRYLDDIFGSRVETRISNEFEIANAVAQADLVIGAVL CCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHEEEEE IPGAKAPKLVTAEMVKRMAPGSVIVDVAIDQGGSVETIDRVTTHQDPVYERFGVVHYAVA ECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH NIPGAVPRTSTWALTNVTLPYALKLANLGWKEALRQDPALAKGANVVSGHVTYPAVAEAH CCCCCCCCCCCEEEEEECHHHHEEECCCCHHHHHHCCCCHHCCCCEEECCCCCCCHHHHC GLEYVELDNVLR CCEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2340274 [H]