Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892939

Identifier: 51892939

GI number: 51892939

Start: 1943829

End: 1944548

Strand: Reverse

Name: 51892939

Synonym: STH1801

Alternate gene names: NA

Gene position: 1944548-1943829 (Counterclockwise)

Preceding gene: 51892940

Following gene: 51892938

Centisome position: 54.53

GC content: 71.39

Gene sequence:

>720_bases
TTGGGGTTCACGGGGCACGCCTTCGTCGACTGGGATGACACGATCGCCGAGAACATCCGCTACTTCCGGGAGGTCGAGGC
GCAGATCAGCCTGCTCATCGCCGGGCGGACCGGGTTTGACCGGGACGAGGTGCAGCGGCGGGGGGCCGAGCTGGACGTGG
CCGTCGCCCGGCAGATGGGGCTGGTGCGGGAGTCGCTGGCCGTCGCCTGGCTGACCTGTTACCGGGAGTTCGCCGGGCGG
GCGGGGCGTCCCGTCGACCCGGTCGTGGAGGCCGAGCTGCGGCGGCTGTGCGCCATCCCCTACGAGACCCGCCAGGAGCT
GCTGCCCGGCGCGGCGGAGACGCTCCGATGGCTCCACGAGGCCGGGTTCGAGGTGACGATCTGGACGGCGGGAGAGGACG
CGGTGCAGCGGCGGAAGATCCAGGAGTCGGGGCTGACCCGCTGGATCCACCGGCAGACAGTGGTGCCGGAGAAGACCGCC
GAGCGGCTGCGGGACGCCATCGGCGACCGCGATCCCGGCCACTGCTTCGTGGTCGGGAACTCCCGCCACTCGGACATCCG
GCCGGCCCTGACGCTGGGGGTCGCCGCCTACCACGTGGATGTGGAGACGTGGGCCTACGACCATCTGGACGTGGACGAGG
AGGATCCCAACTACCACCGGCTGACGCACATCGGCGAACTGCCGCGCCTTCTGGCCCAGCGGTTCCGCCTGGCGGTGTGA

Upstream 100 bases:

>100_bases
GGAGGTGCAGGCCTCGCTGTTTGCGGGCGGGGAGGAACCGTCCGCCGAAGCGGCGGACGGCGGCGCAGGGGAGTCGACGC
ACGGGGAGGAGGAGTAGCGG

Downstream 100 bases:

>100_bases
CGGGCTGCCGGCCCCGACGGGGGGCCGGCGGCCTTCGTCTTTCCCGCCGCCGGACGTTTCCGACGGTGAGCCCGTCGCGG
TGGGGAATGGACCGCCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehydrogenase Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MGFTGHAFVDWDDTIAENIRYFREVEAQISLLIAGRTGFDRDEVQRRGAELDVAVARQMGLVRESLAVAWLTCYREFAGR
AGRPVDPVVEAELRRLCAIPYETRQELLPGAAETLRWLHEAGFEVTIWTAGEDAVQRRKIQESGLTRWIHRQTVVPEKTA
ERLRDAIGDRDPGHCFVVGNSRHSDIRPALTLGVAAYHVDVETWAYDHLDVDEEDPNYHRLTHIGELPRLLAQRFRLAV

Sequences:

>Translated_239_residues
MGFTGHAFVDWDDTIAENIRYFREVEAQISLLIAGRTGFDRDEVQRRGAELDVAVARQMGLVRESLAVAWLTCYREFAGR
AGRPVDPVVEAELRRLCAIPYETRQELLPGAAETLRWLHEAGFEVTIWTAGEDAVQRRKIQESGLTRWIHRQTVVPEKTA
ERLRDAIGDRDPGHCFVVGNSRHSDIRPALTLGVAAYHVDVETWAYDHLDVDEEDPNYHRLTHIGELPRLLAQRFRLAV
>Mature_238_residues
GFTGHAFVDWDDTIAENIRYFREVEAQISLLIAGRTGFDRDEVQRRGAELDVAVARQMGLVRESLAVAWLTCYREFAGRA
GRPVDPVVEAELRRLCAIPYETRQELLPGAAETLRWLHEAGFEVTIWTAGEDAVQRRKIQESGLTRWIHRQTVVPEKTAE
RLRDAIGDRDPGHCFVVGNSRHSDIRPALTLGVAAYHVDVETWAYDHLDVDEEDPNYHRLTHIGELPRLLAQRFRLAV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27251; Mature: 27120

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFTGHAFVDWDDTIAENIRYFREVEAQISLLIAGRTGFDRDEVQRRGAELDVAVARQMG
CCCCCCEEECCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCCHHHHHHHHH
LVRESLAVAWLTCYREFAGRAGRPVDPVVEAELRRLCAIPYETRQELLPGAAETLRWLHE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
AGFEVTIWTAGEDAVQRRKIQESGLTRWIHRQTVVPEKTAERLRDAIGDRDPGHCFVVGN
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEC
SRHSDIRPALTLGVAAYHVDVETWAYDHLDVDEEDPNYHRLTHIGELPRLLAQRFRLAV
CCCCCCCHHHHHHHHHEEEEHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFTGHAFVDWDDTIAENIRYFREVEAQISLLIAGRTGFDRDEVQRRGAELDVAVARQMG
CCCCCEEECCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCCHHHHHHHHH
LVRESLAVAWLTCYREFAGRAGRPVDPVVEAELRRLCAIPYETRQELLPGAAETLRWLHE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
AGFEVTIWTAGEDAVQRRKIQESGLTRWIHRQTVVPEKTAERLRDAIGDRDPGHCFVVGN
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEC
SRHSDIRPALTLGVAAYHVDVETWAYDHLDVDEEDPNYHRLTHIGELPRLLAQRFRLAV
CCCCCCCHHHHHHHHHEEEEHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA