| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892918
Identifier: 51892918
GI number: 51892918
Start: 1924917
End: 1925663
Strand: Reverse
Name: 51892918
Synonym: STH1780
Alternate gene names: NA
Gene position: 1925663-1924917 (Counterclockwise)
Preceding gene: 51892919
Following gene: 51892917
Centisome position: 54.0
GC content: 72.16
Gene sequence:
>747_bases TTGCACTGGTGGGAGGAAACGGAGGCGCGCATCCACCGCACCACGTCGGCCGCGACGCTGGGCCAGGGCCTCTGGCAGCG GCTCGTGCAGGCGGGGCTGGAGCCCGACGCGGCGTACCTCGCCGCGTACGATCTCGCGGCGCTCCAGCTCCTCTGCGCGG ATCTGGTGAAGCTGGTGGACAGCCTCCTGGAGGTGGCCGATGGCGATCGGGCGGGCTGGCGTCGCCACGCGCTGGCCCTG CTGCGGTGGGCCAACAGCGCCGAGTCCTGGGCCCGGGAGACGGCGGCCGCGACCAACCGGCTGCTGGACAGCCTGGATCT GGAGCCGTCGACCCTCGCGGCACGGGAGGAGGTCGAGGCGGAGCCGAACGGGGCGCTCTCCCCCGAGGAGGAGGCGAAAC TGGACGGGCGGTACCGCCACTGGCACCTGCTGTACGAGCGGCTGGACCTGAAGCTGTCCACCATGGGGCTGGAGGAGGCC GTCCAGCGGGCCGTGGCCCGGACGCTGGCGCGGCTTTACGAGGAGGCGGTGGTCACCTTCCGGCTGCTCTCGGGCCTGAG CCGGGAGAGCCGGCCGCGTTACGGGCAGGTGGCCAGGTTGTTGCTGCAGATCAACACCACGTGGCACTTTGACCTGGGCC CTTACCTGCTGGGCCTCGGACAGGCGCGCCCGGACGGCCGGGGGACGGTGGGGCTGGCCACCTGGCTGCTGCTGGCGTCG CGGGAACCGGACATGCACATGGGTTAA
Upstream 100 bases:
>100_bases GAGCTGGAGGAGGCTGTGGACTACCTGCTGGAGGAGGTGGCCGCCCGGCTCAGGCAGCTCTGAGCCGGGGGGCCGTCCGG CTCGCGGGAGGAGGATGGCG
Downstream 100 bases:
>100_bases TACGCAATTCTCTTAACCTTGACAGAAAGCGCGTGGCGGGTTATCATGAAAAGAGGTCCGCCACTTTGTGCGAGCCATTG GTTGTGCGATGGATGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MHWWEETEARIHRTTSAATLGQGLWQRLVQAGLEPDAAYLAAYDLAALQLLCADLVKLVDSLLEVADGDRAGWRRHALAL LRWANSAESWARETAAATNRLLDSLDLEPSTLAAREEVEAEPNGALSPEEEAKLDGRYRHWHLLYERLDLKLSTMGLEEA VQRAVARTLARLYEEAVVTFRLLSGLSRESRPRYGQVARLLLQINTTWHFDLGPYLLGLGQARPDGRGTVGLATWLLLAS REPDMHMG
Sequences:
>Translated_248_residues MHWWEETEARIHRTTSAATLGQGLWQRLVQAGLEPDAAYLAAYDLAALQLLCADLVKLVDSLLEVADGDRAGWRRHALAL LRWANSAESWARETAAATNRLLDSLDLEPSTLAAREEVEAEPNGALSPEEEAKLDGRYRHWHLLYERLDLKLSTMGLEEA VQRAVARTLARLYEEAVVTFRLLSGLSRESRPRYGQVARLLLQINTTWHFDLGPYLLGLGQARPDGRGTVGLATWLLLAS REPDMHMG >Mature_248_residues MHWWEETEARIHRTTSAATLGQGLWQRLVQAGLEPDAAYLAAYDLAALQLLCADLVKLVDSLLEVADGDRAGWRRHALAL LRWANSAESWARETAAATNRLLDSLDLEPSTLAAREEVEAEPNGALSPEEEAKLDGRYRHWHLLYERLDLKLSTMGLEEA VQRAVARTLARLYEEAVVTFRLLSGLSRESRPRYGQVARLLLQINTTWHFDLGPYLLGLGQARPDGRGTVGLATWLLLAS REPDMHMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27774; Mature: 27774
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWWEETEARIHRTTSAATLGQGLWQRLVQAGLEPDAAYLAAYDLAALQLLCADLVKLVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLLEVADGDRAGWRRHALALLRWANSAESWARETAAATNRLLDSLDLEPSTLAAREEVEA HHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC EPNGALSPEEEAKLDGRYRHWHLLYERLDLKLSTMGLEEAVQRAVARTLARLYEEAVVTF CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RLLSGLSRESRPRYGQVARLLLQINTTWHFDLGPYLLGLGQARPDGRGTVGLATWLLLAS HHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC REPDMHMG CCCCCCCC >Mature Secondary Structure MHWWEETEARIHRTTSAATLGQGLWQRLVQAGLEPDAAYLAAYDLAALQLLCADLVKLVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLLEVADGDRAGWRRHALALLRWANSAESWARETAAATNRLLDSLDLEPSTLAAREEVEA HHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC EPNGALSPEEEAKLDGRYRHWHLLYERLDLKLSTMGLEEAVQRAVARTLARLYEEAVVTF CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RLLSGLSRESRPRYGQVARLLLQINTTWHFDLGPYLLGLGQARPDGRGTVGLATWLLLAS HHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHC REPDMHMG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA