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The map label for this gene is 51892892

Identifier: 51892892

GI number: 51892892

Start: 1898749

End: 1899381

Strand: Reverse

Name: 51892892

Synonym: STH1754

Alternate gene names: NA

Gene position: 1899381-1898749 (Counterclockwise)

Preceding gene: 51892893

Following gene: 51892890

Centisome position: 53.26

GC content: 62.56

Gene sequence:

>633_bases
ATGACTGCAACATCTACGTCCGCAGCAAACGGGCGGGAGAACGGGTCTACAGGAGCGTGCGCCACTTCCTGCAGGAGCGG
TTACGGCTTGAAGGTCAACGAGGAGAAGAGCGCAGTGGACCGGCCGTGGAAGCGGCAGTTCCTCGGGTTTAGCTTCTACA
AGCACCGGGGAGTGCGCATCCGGCTGGCCCCGAAGAGCCTGAAACGCGTGAAGGACAAGCTCCGCACGCTGACGGACCGC
AACCGCAGCCAGAGCATGGAGGACCGAATCCGGTGCCTGAATGCCTACTTGCGGGGCTGGGTTGGGTACTATGCGCTCTC
CGATGCCAGGTCAGCCTTTGAAAGACTCGAAGGATGGCTGAAGCGTCGGCTGCGAGCATGCGTATGGAGGCAGTGGAAGC
GTGTACGCACGCGCTTTCGGGAGTTACGCGCCCTCGGTTTGCCCGAATGGGTAGTCTACCAACTCGCCAACAGCCGCAAA
GGCCCGTGGCGGATGGCAGGTGGCCCACTAAACAGCGCCCTGGGCGACGCCTACTGGCGTGCCCAGGGGCTGATAAGCCT
GACCGAATGCTATGAAGCGACTCGTCAATCCTGGCGAACCGCCGGATGCGGACCCGCATGTCCGGTGGTGTGA

Upstream 100 bases:

>100_bases
CCGCAGGGCGGTCCGCTGAGTCCGCTGCTGGCGAACATCCTGCTGGATGACCTCGACAAGGAGCTGGAGCGCCGTGGCCA
CCACTTTGTCCGGTACGCCG

Downstream 100 bases:

>100_bases
GAGGACGGGGGCTAGCCGCCCCCTCCTACTCGATCTTCGGGAGCTGGGGCGGCGGCCTGTCGCTCAGGTATCCTGCCGGA
GGAAGCGCTTGATCAGGGCG

Product: group II intron-encoding maturase variant

Products: NA

Alternate protein names: Reverse Transcriptase/Maturase Family Protein; Reverse Transcriptase/Maturase; Reverse Transcriptase; Group II Intron-Encoding Maturase; Recombinase; Group II Intron-Encoding Maturase Variant; Retron-Type Reverse Transcriptase; Group II Intron Maturase-Specific Domain-Containing Protein; Reverse Transcriptase/Maturase Group FT II Introns; Integron/Retron-Type RNA-Directed DNA Polymerase; Group II Intron Maturase; Group II Intron-Encoded Protein; Transposase; GBSi1 Group II Intron Maturase; Reverse Transcriptasematurase Protein; Na-Directed DNA Polymerase; Regulatory Protein GntR; Maturase; Ecombinase For Bh.Int; Group II Intron-Encoded Maturase; Group II Intron Maturase-Specific Domain Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTATSTSAANGRENGSTGACATSCRSGYGLKVNEEKSAVDRPWKRQFLGFSFYKHRGVRIRLAPKSLKRVKDKLRTLTDR
NRSQSMEDRIRCLNAYLRGWVGYYALSDARSAFERLEGWLKRRLRACVWRQWKRVRTRFRELRALGLPEWVVYQLANSRK
GPWRMAGGPLNSALGDAYWRAQGLISLTECYEATRQSWRTAGCGPACPVV

Sequences:

>Translated_210_residues
MTATSTSAANGRENGSTGACATSCRSGYGLKVNEEKSAVDRPWKRQFLGFSFYKHRGVRIRLAPKSLKRVKDKLRTLTDR
NRSQSMEDRIRCLNAYLRGWVGYYALSDARSAFERLEGWLKRRLRACVWRQWKRVRTRFRELRALGLPEWVVYQLANSRK
GPWRMAGGPLNSALGDAYWRAQGLISLTECYEATRQSWRTAGCGPACPVV
>Mature_209_residues
TATSTSAANGRENGSTGACATSCRSGYGLKVNEEKSAVDRPWKRQFLGFSFYKHRGVRIRLAPKSLKRVKDKLRTLTDRN
RSQSMEDRIRCLNAYLRGWVGYYALSDARSAFERLEGWLKRRLRACVWRQWKRVRTRFRELRALGLPEWVVYQLANSRKG
PWRMAGGPLNSALGDAYWRAQGLISLTECYEATRQSWRTAGCGPACPVV

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24031; Mature: 23900

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSTSAANGRENGSTGACATSCRSGYGLKVNEEKSAVDRPWKRQFLGFSFYKHRGVRI
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHCCCEE
RLAPKSLKRVKDKLRTLTDRNRSQSMEDRIRCLNAYLRGWVGYYALSDARSAFERLEGWL
EECHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRRLRACVWRQWKRVRTRFRELRALGLPEWVVYQLANSRKGPWRMAGGPLNSALGDAYWR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AQGLISLTECYEATRQSWRTAGCGPACPVV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TATSTSAANGRENGSTGACATSCRSGYGLKVNEEKSAVDRPWKRQFLGFSFYKHRGVRI
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHCCCEE
RLAPKSLKRVKDKLRTLTDRNRSQSMEDRIRCLNAYLRGWVGYYALSDARSAFERLEGWL
EECHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRRLRACVWRQWKRVRTRFRELRALGLPEWVVYQLANSRKGPWRMAGGPLNSALGDAYWR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AQGLISLTECYEATRQSWRTAGCGPACPVV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA