| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is phnB [H]
Identifier: 51892861
GI number: 51892861
Start: 1871127
End: 1871546
Strand: Reverse
Name: phnB [H]
Synonym: STH1723
Alternate gene names: 51892861
Gene position: 1871546-1871127 (Counterclockwise)
Preceding gene: 51892862
Following gene: 51892858
Centisome position: 52.48
GC content: 66.19
Gene sequence:
>420_bases GTGCGCATTGTGCCGTATCTCGTGTTTGGCGGAAACGCCAGGGAAGCCATCCAGTTCTATGCCGACGTGCTGGACGGCAG GATCGAGGGCATCCTGACGTTCGGGGACAACCCCTTCCCCGGCATGCCCGAGGAGGCCGAGAATCGGGTGATGCACGCCC AACTTACGGTGGGTGACTCCGCGCTGTTCTTCTCCGATACCTACCCCGGCCAGGACCACCGCCCCGGCAACCAGGTCGCC GTCACCCTCCTGGTGGACACCGTCGAAGAGGCGGAGCGCATCTACACCGCCCTGGCCGAGGGCGCGCAGGAGATCGCGCT GCCGCTGCAGCAGACCGACTGGAGCCCGGCCTACGCCCAGGTGACCGACAAGTTCGGCGTCCCGTTCCAGATCAACACCG TCCCGGCAGATCAGGCGTAG
Upstream 100 bases:
>100_bases GCGCACCCGCTGCGGGCGCACACTGAGGACGCCAGGTAGCCGGACGCGATCCCCGGCCCCCTGGCCCCAGCACCGGAGCA AGGGAGAGCATGTCATGGCG
Downstream 100 bases:
>100_bases AGATGCCCGCGGTCCGCCGGCTCCCCTCCGGCGGGCGTGAAAGAGGACCACCCACTGCGGTGGTCCTGCGGTTCGCGGTT CACTTGCCGTTCGGCTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRIVPYLVFGGNAREAIQFYADVLDGRIEGILTFGDNPFPGMPEEAENRVMHAQLTVGDSALFFSDTYPGQDHRPGNQVA VTLLVDTVEEAERIYTALAEGAQEIALPLQQTDWSPAYAQVTDKFGVPFQINTVPADQA
Sequences:
>Translated_139_residues MRIVPYLVFGGNAREAIQFYADVLDGRIEGILTFGDNPFPGMPEEAENRVMHAQLTVGDSALFFSDTYPGQDHRPGNQVA VTLLVDTVEEAERIYTALAEGAQEIALPLQQTDWSPAYAQVTDKFGVPFQINTVPADQA >Mature_139_residues MRIVPYLVFGGNAREAIQFYADVLDGRIEGILTFGDNPFPGMPEEAENRVMHAQLTVGDSALFFSDTYPGQDHRPGNQVA VTLLVDTVEEAERIYTALAEGAQEIALPLQQTDWSPAYAQVTDKFGVPFQINTVPADQA
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=147, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15245; Mature: 15245
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVPYLVFGGNAREAIQFYADVLDGRIEGILTFGDNPFPGMPEEAENRVMHAQLTVGDS CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCEEEEEEEECCC ALFFSDTYPGQDHRPGNQVAVTLLVDTVEEAERIYTALAEGAQEIALPLQQTDWSPAYAQ EEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHH VTDKFGVPFQINTVPADQA HHHCCCCCEEEECCCCCCC >Mature Secondary Structure MRIVPYLVFGGNAREAIQFYADVLDGRIEGILTFGDNPFPGMPEEAENRVMHAQLTVGDS CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCEEEEEEEECCC ALFFSDTYPGQDHRPGNQVAVTLLVDTVEEAERIYTALAEGAQEIALPLQQTDWSPAYAQ EEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHH VTDKFGVPFQINTVPADQA HHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]