| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892858
Identifier: 51892858
GI number: 51892858
Start: 1867445
End: 1867678
Strand: Reverse
Name: 51892858
Synonym: STH1720
Alternate gene names: NA
Gene position: 1867678-1867445 (Counterclockwise)
Preceding gene: 51892861
Following gene: 51892849
Centisome position: 52.37
GC content: 66.67
Gene sequence:
>234_bases GTGGCTCAGTTCACGCCCACCCGCCGCGTTTTACCGCATGAGCTCCTGGACCGGCTGAAGTGGGAGGTCGCCGAGCAGGC CGGCCTCACGGAGCAGATCGTGCAGCATGGCTGGCCCCAGATGAGCTCACGCGCCTGTGGCCACATCGGAGGCCGCATCG GCGGCAGGATGGTCAAGGTCATGCTGAAGTACGCCGAGCAGGCCCTGGCTGAGGGCTCCGCTACCCTGAAGTAG
Upstream 100 bases:
>100_bases GCGATGGCCCGTGGCCGGCCGTTGTGCCGCGCATTGGTAGACATAACGACACCGGCGGCTGCGCACACTACAGGCGTAAA ACCGCAGGAGGTGGTGTTCC
Downstream 100 bases:
>100_bases CGGGGCTGCCCACCAGGCGGGGGGCGCGCACCCCGCCGATGACATATAGAACAGGCCGGCTGCACAGCCGGCCTGTTCCG CTCACGCGCCCAGGGCCTGG
Product: small acid-soluble spore protein
Products: NA
Alternate protein names: Small Acid-Soluble Spore Protein Alpha/Beta Type
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAQFTPTRRVLPHELLDRLKWEVAEQAGLTEQIVQHGWPQMSSRACGHIGGRIGGRMVKVMLKYAEQALAEGSATLK
Sequences:
>Translated_77_residues MAQFTPTRRVLPHELLDRLKWEVAEQAGLTEQIVQHGWPQMSSRACGHIGGRIGGRMVKVMLKYAEQALAEGSATLK >Mature_76_residues AQFTPTRRVLPHELLDRLKWEVAEQAGLTEQIVQHGWPQMSSRACGHIGGRIGGRMVKVMLKYAEQALAEGSATLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8571; Mature: 8440
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFTPTRRVLPHELLDRLKWEVAEQAGLTEQIVQHGWPQMSSRACGHIGGRIGGRMVKV CCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH MLKYAEQALAEGSATLK HHHHHHHHHHCCCCCCC >Mature Secondary Structure AQFTPTRRVLPHELLDRLKWEVAEQAGLTEQIVQHGWPQMSSRACGHIGGRIGGRMVKV CCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH MLKYAEQALAEGSATLK HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA