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The map label for this gene is ythA [H]

Identifier: 51892830

GI number: 51892830

Start: 1839223

End: 1840485

Strand: Reverse

Name: ythA [H]

Synonym: STH1692

Alternate gene names: 51892830

Gene position: 1840485-1839223 (Counterclockwise)

Preceding gene: 51892833

Following gene: 51892829

Centisome position: 51.61

GC content: 70.39

Gene sequence:

>1263_bases
ATGGCCTACTCCCTCTTCTTCCACATGATCTTCGCCGCCCTCGGAGTCGGCATGCCGGCCCTGCTCGCAACAGCCGACTA
CCTGCACCTGCGCACCCGGGACCGGGACTACGAACGACTGGCCAAGACCTGGGCCCGGGCCACCGCCGTGCTCTTCGCCA
TCGGCGCCGTGAGCGGCACGGGCATCGCGTTCGAGCTGGGGCTCCTCTGGCCCGAGTTCATGCACTTCGCCGGCTCCACC
GTTGGTCCGGCTTTCACGCTGGAGGGCTACGCCTTCTTCACGGAGGCCATCTTCATCGGCCTGTACCTGTATGGGCGGGA
GCGGATGCGCCCCGTGGCGCACTGGCTCACCGCCGTCGCGGTGGCGGTCAGCGGCGCGGCCTCCTCCTTCCTGGTCACGG
CGGCCAACGCCTGGCAGCAGAACCCTGTGGGCGTCGACCTGCTCCAGAGCAATCCGGAGGCCATGAACCCCTGGACCGTG
TTCGTCAACCCGCACTGGCCGGTCATGGCCGTCCACTCCACCATCGCCTGTTACGCGGCCACGGGCTACGCCGTCGCCGG
CGTGTACGCCTGGGGCATGCTCCGGGGGCGCGGCGACCCGCTGCGGCAGAAGGCCCTCCGCATCGCCCTCGCCATGGGGC
TCATCGCCGCGGTCACCATGCCGCTGACCGGGGACCTGTCCGCCAAGGTGGTGGCCCGCCACCAGCCGGAGAAGCTGGCG
GCGATGGAGGCGCTCTTCGTCACCCAGGCGCGGGCGCCGCTCCTGATCGGCGGCCTGCCGAACCCGGAGGAAGGAACGGT
CTGCTGCGCCGTGGCGGTGCCGGGACTCCTCTCTTTTCTGGCCTACGGGCGGCTGGACGCCGAGGTGGCGGGGCTTGACC
GGGTTCCCCGGCAGGAGTGGCCCAATGTGCCGCTGGTGCACATCTCCTTCCAGCTCATGGTGGGAGCCGGCATCGCCATG
GTGTTGGTGGGCCTGTACTACGCCTGGGTCCGGTGGCGCCGGCCGGAGCAGGTGCCCCGGGACCGGAGGCTGCTGTGGCT
GCTGGTCCTTTCCTCGCCGTTGGGATACCTGGCCCTGGAGGCGGGCTGGATCGTCAGCGAGACCGGCCGGCAGCCCTGGA
CCATCTGGAAGGTGATGCTGACGGCCGACGCGGTCACGCCTTCAGGCAGCACCATGGCCCTGTCGATGGCGGGGTTCACG
GCGCTTTACGCCGCGCTGGCGGCGGCCCTCGTCCTGCTGCTCAACCGGCTGCGGCACGAGTGA

Upstream 100 bases:

>100_bases
GATCGGTGCGCCCCCTGCGCCAGATGGTGGTCAGGCTGCCACCCCCAGAACTCGCTCGGGAGGTACCCGCGTGTCCCATC
TCGACGCCGCACGGTTCCAG

Downstream 100 bases:

>100_bases
CGAAAGGAGGTGGGCACGCCATGGAACCCTGGCTGGGACTGGACCCCGTGGCAGGCGTCGCAGGGGTGATGCTGCTGGCC
CTCATGGCCTACGCGGTCCT

Product: cytochrome D ubiquinol oxidase subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGTGIAFELGLLWPEFMHFAGST
VGPAFTLEGYAFFTEAIFIGLYLYGRERMRPVAHWLTAVAVAVSGAASSFLVTAANAWQQNPVGVDLLQSNPEAMNPWTV
FVNPHWPVMAVHSTIACYAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPEKLA
AMEALFVTQARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVPRQEWPNVPLVHISFQLMVGAGIAM
VLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALEAGWIVSETGRQPWTIWKVMLTADAVTPSGSTMALSMAGFT
ALYAALAAALVLLLNRLRHE

Sequences:

>Translated_420_residues
MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGTGIAFELGLLWPEFMHFAGST
VGPAFTLEGYAFFTEAIFIGLYLYGRERMRPVAHWLTAVAVAVSGAASSFLVTAANAWQQNPVGVDLLQSNPEAMNPWTV
FVNPHWPVMAVHSTIACYAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPEKLA
AMEALFVTQARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVPRQEWPNVPLVHISFQLMVGAGIAM
VLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALEAGWIVSETGRQPWTIWKVMLTADAVTPSGSTMALSMAGFT
ALYAALAAALVLLLNRLRHE
>Mature_419_residues
AYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGTGIAFELGLLWPEFMHFAGSTV
GPAFTLEGYAFFTEAIFIGLYLYGRERMRPVAHWLTAVAVAVSGAASSFLVTAANAWQQNPVGVDLLQSNPEAMNPWTVF
VNPHWPVMAVHSTIACYAATGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPEKLAA
MEALFVTQARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVPRQEWPNVPLVHISFQLMVGAGIAMV
LVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALEAGWIVSETGRQPWTIWKVMLTADAVTPSGSTMALSMAGFTA
LYAALAAALVLLLNRLRHE

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=300, Percent_Identity=31, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787212, Length=485, Percent_Identity=26.8041237113402, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 45639; Mature: 45508

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGT
CHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GIAFELGLLWPEFMHFAGSTVGPAFTLEGYAFFTEAIFIGLYLYGRERMRPVAHWLTAVA
CCEEEHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VAVSGAASSFLVTAANAWQQNPVGVDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIACYAA
HHHHCCCHHHEEEEHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCEEHHHHHHHHHHH
TGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPEKLA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHH
AMEALFVTQARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVPRQEW
HHHHHHHHHCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHC
PNVPLVHISFQLMVGAGIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALE
CCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEHHCCCCCEEEE
AGWIVSETGRQPWTIWKVMLTADAVTPSGSTMALSMAGFTALYAALAAALVLLLNRLRHE
CCEEEECCCCCCHHEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AYSLFFHMIFAALGVGMPALLATADYLHLRTRDRDYERLAKTWARATAVLFAIGAVSGT
HHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GIAFELGLLWPEFMHFAGSTVGPAFTLEGYAFFTEAIFIGLYLYGRERMRPVAHWLTAVA
CCEEEHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VAVSGAASSFLVTAANAWQQNPVGVDLLQSNPEAMNPWTVFVNPHWPVMAVHSTIACYAA
HHHHCCCHHHEEEEHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCEEHHHHHHHHHHH
TGYAVAGVYAWGMLRGRGDPLRQKALRIALAMGLIAAVTMPLTGDLSAKVVARHQPEKLA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHH
AMEALFVTQARAPLLIGGLPNPEEGTVCCAVAVPGLLSFLAYGRLDAEVAGLDRVPRQEW
HHHHHHHHHCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHC
PNVPLVHISFQLMVGAGIAMVLVGLYYAWVRWRRPEQVPRDRRLLWLLVLSSPLGYLALE
CCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEHHCCCCCEEEE
AGWIVSETGRQPWTIWKVMLTADAVTPSGSTMALSMAGFTALYAALAAALVLLLNRLRHE
CCEEEECCCCCCHHEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]