Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892708

Identifier: 51892708

GI number: 51892708

Start: 1708037

End: 1709635

Strand: Reverse

Name: 51892708

Synonym: STH1570

Alternate gene names: NA

Gene position: 1709635-1708037 (Counterclockwise)

Preceding gene: 51892719

Following gene: 51892707

Centisome position: 47.94

GC content: 71.98

Gene sequence:

>1599_bases
GTGAGTGAACGGGAGGGAATCGCCATGGCAATCACTCCGGCATCCGGCCTGGCGGTCGCCAGGTTGACCGAACTCCGACC
GGCCCGGTCCCACCGCCATCAGGACGGCAAGGCTATGGAAGGGTTTTGCCTGGTGACCGGCGATGCAAACTTCAGCCGGG
TCACGCTGTTCGTGGAGAACGGCCGCACCCTGACCGACCGCTCCGGCCAAGGGGGCTTCTACTATGAAGGCTGGCTCGTG
GGCCCCGCCGGCGTGGTGAGCCTGGGGGCGTTCAACGTGGGCCCGGACGGCAGGGGCAGCGCCACCCGCGTCGTCGCCGC
GTCGCACCTCCGGCCCGGGCGGGCGGAACTGGTACGGGTGACCGTGGAGCCCTTCGGCGGCACGGCCGACGGGGGCATCG
CCGTTCTGGAGGGAAGGCTCATCTGGCTGGACGCAGCCGCCGAGCCGCGGCCTGTGACGGGCATGGCGACGACGGTTTCG
CAGCAGCCCACCGCGGGAGCGGCGACCGCGGTTGCGCAGCAACCGGCCACGGGAGCGCCGACCATAGTTGCGCAGCAACC
GACGGCTGGAATGGCGACCCCGTGGGCGCAGCCTGCGGCGGGGCCATCGGCGGCGACCGGGCGGGGGCCTGTGGCTCCGG
CCTGGTCGTCAGGGTCGACCGCCGGCAGCTCTTCCGCCTCCGGCACCGGTCAGCCCGGCCGCACGGCCGGCCCCTTCATC
TCGGATCAGCCGGCCGGTACGACCGCCTCCGCCGTAGCCGATGAGCCCGCGGGCACGCACGTCTCCGTCGTGGCCGATCC
GCCCGCCGGCACGACTGCCTCCGCTGACGTCGTTCCATCCCCCGGCACCACCACTCTCACCGATCAGCCCGACGGCACAT
CCGTCGGAAACGCACCCGGTCTGCCCGCCACCGAATCGGTTCCGGCCCGGGCAGAGCCCTTCGCGGCGGAAGGTGAAAGC
GGTCTGCGGGGTTCCCCTGGCGACCCCGACACGTGGGAAACCGCTCCCATCGTCGCGGACAGCGGCTCCGCTCCTGCCCA
GTCGGCCGCGGGCGCTGTCGCAGACGTCCCGGCGCAGGAGGGCGTACACGCTTCAGGAGACCAGACGCACTCGACCGGCG
CAACCGGCACGACGGACCAGGACCAGGCGCCCGCTGACGCCTCCGCTCAGGAGGAGGCCACGTCCCAGTCGCAACCGGCA
CCCCGGTACGTCAATCCCCTGGCCGTGCAGGTCCAGCTCGTGCAGCGCCATCCGATGACCCCGCGCGCCACGGGCACGGC
GACCCTCAACCTGCGCCGCGGCCACCTGACCCTTTCGCTGCGCGGCCTGCCCAGCCCGACGGCGCTCGGGCGAGACGGCA
AGAGCGGACGCCCCTTCAATGCCTACCGCGTCTGGCTGGTCAACCAGAAGACCCAGATGCGCACCCCGGCAGGGTACTGC
GAGCGCGTCTGGGGTGAGAACTTCCGCTTCGAGGCCGACGGCCTGCCGCTCAACCGCAGCGATACCATCCTGATCACCGC
GGAGGACCGCTCCGTCGCCACCTCCACCGGCCATCCCGCGCCGCAGGTCCTCATCGGCACCTACGACCCGAGACTCTAA

Upstream 100 bases:

>100_bases
CACACAACAGATTCCTGCCGCGTGTGACAAAATATGAACCATCGGCTGAAAAACGTCACATCACATGACCGGGAGCCGGT
CCGCATAAGGTCATCTGGAA

Downstream 100 bases:

>100_bases
GTCTGAACTGTCAATGCCAGCGACTACCCGCAGGGGAATGAGCATTCTGCCTTGAATCACCCCTCGGGGTGATTTGATGA
GACGCTACCTGCCCATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MSEREGIAMAITPASGLAVARLTELRPARSHRHQDGKAMEGFCLVTGDANFSRVTLFVENGRTLTDRSGQGGFYYEGWLV
GPAGVVSLGAFNVGPDGRGSATRVVAASHLRPGRAELVRVTVEPFGGTADGGIAVLEGRLIWLDAAAEPRPVTGMATTVS
QQPTAGAATAVAQQPATGAPTIVAQQPTAGMATPWAQPAAGPSAATGRGPVAPAWSSGSTAGSSSASGTGQPGRTAGPFI
SDQPAGTTASAVADEPAGTHVSVVADPPAGTTASADVVPSPGTTTLTDQPDGTSVGNAPGLPATESVPARAEPFAAEGES
GLRGSPGDPDTWETAPIVADSGSAPAQSAAGAVADVPAQEGVHASGDQTHSTGATGTTDQDQAPADASAQEEATSQSQPA
PRYVNPLAVQVQLVQRHPMTPRATGTATLNLRRGHLTLSLRGLPSPTALGRDGKSGRPFNAYRVWLVNQKTQMRTPAGYC
ERVWGENFRFEADGLPLNRSDTILITAEDRSVATSTGHPAPQVLIGTYDPRL

Sequences:

>Translated_532_residues
MSEREGIAMAITPASGLAVARLTELRPARSHRHQDGKAMEGFCLVTGDANFSRVTLFVENGRTLTDRSGQGGFYYEGWLV
GPAGVVSLGAFNVGPDGRGSATRVVAASHLRPGRAELVRVTVEPFGGTADGGIAVLEGRLIWLDAAAEPRPVTGMATTVS
QQPTAGAATAVAQQPATGAPTIVAQQPTAGMATPWAQPAAGPSAATGRGPVAPAWSSGSTAGSSSASGTGQPGRTAGPFI
SDQPAGTTASAVADEPAGTHVSVVADPPAGTTASADVVPSPGTTTLTDQPDGTSVGNAPGLPATESVPARAEPFAAEGES
GLRGSPGDPDTWETAPIVADSGSAPAQSAAGAVADVPAQEGVHASGDQTHSTGATGTTDQDQAPADASAQEEATSQSQPA
PRYVNPLAVQVQLVQRHPMTPRATGTATLNLRRGHLTLSLRGLPSPTALGRDGKSGRPFNAYRVWLVNQKTQMRTPAGYC
ERVWGENFRFEADGLPLNRSDTILITAEDRSVATSTGHPAPQVLIGTYDPRL
>Mature_531_residues
SEREGIAMAITPASGLAVARLTELRPARSHRHQDGKAMEGFCLVTGDANFSRVTLFVENGRTLTDRSGQGGFYYEGWLVG
PAGVVSLGAFNVGPDGRGSATRVVAASHLRPGRAELVRVTVEPFGGTADGGIAVLEGRLIWLDAAAEPRPVTGMATTVSQ
QPTAGAATAVAQQPATGAPTIVAQQPTAGMATPWAQPAAGPSAATGRGPVAPAWSSGSTAGSSSASGTGQPGRTAGPFIS
DQPAGTTASAVADEPAGTHVSVVADPPAGTTASADVVPSPGTTTLTDQPDGTSVGNAPGLPATESVPARAEPFAAEGESG
LRGSPGDPDTWETAPIVADSGSAPAQSAAGAVADVPAQEGVHASGDQTHSTGATGTTDQDQAPADASAQEEATSQSQPAP
RYVNPLAVQVQLVQRHPMTPRATGTATLNLRRGHLTLSLRGLPSPTALGRDGKSGRPFNAYRVWLVNQKTQMRTPAGYCE
RVWGENFRFEADGLPLNRSDTILITAEDRSVATSTGHPAPQVLIGTYDPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54022; Mature: 53891

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEREGIAMAITPASGLAVARLTELRPARSHRHQDGKAMEGFCLVTGDANFSRVTLFVEN
CCCCCCEEEEEECCCCCCHHHHHHHCHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEC
GRTLTDRSGQGGFYYEGWLVGPAGVVSLGAFNVGPDGRGSATRVVAASHLRPGRAELVRV
CCEEECCCCCCCEEEEEEEECCHHEEEECEEECCCCCCCCCEEEEEECCCCCCCEEEEEE
TVEPFGGTADGGIAVLEGRLIWLDAAAEPRPVTGMATTVSQQPTAGAATAVAQQPATGAP
EEECCCCCCCCCEEEEECEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCC
TIVAQQPTAGMATPWAQPAAGPSAATGRGPVAPAWSSGSTAGSSSASGTGQPGRTAGPFI
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SDQPAGTTASAVADEPAGTHVSVVADPPAGTTASADVVPSPGTTTLTDQPDGTSVGNAPG
CCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
LPATESVPARAEPFAAEGESGLRGSPGDPDTWETAPIVADSGSAPAQSAAGAVADVPAQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCEECCCHHC
GVHASGDQTHSTGATGTTDQDQAPADASAQEEATSQSQPAPRYVNPLAVQVQLVQRHPMT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEHHCCCC
PRATGTATLNLRRGHLTLSLRGLPSPTALGRDGKSGRPFNAYRVWLVNQKTQMRTPAGYC
CCCCCEEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCHHHH
ERVWGENFRFEADGLPLNRSDTILITAEDRSVATSTGHPAPQVLIGTYDPRL
HHHCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SEREGIAMAITPASGLAVARLTELRPARSHRHQDGKAMEGFCLVTGDANFSRVTLFVEN
CCCCCEEEEEECCCCCCHHHHHHHCHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEC
GRTLTDRSGQGGFYYEGWLVGPAGVVSLGAFNVGPDGRGSATRVVAASHLRPGRAELVRV
CCEEECCCCCCCEEEEEEEECCHHEEEECEEECCCCCCCCCEEEEEECCCCCCCEEEEEE
TVEPFGGTADGGIAVLEGRLIWLDAAAEPRPVTGMATTVSQQPTAGAATAVAQQPATGAP
EEECCCCCCCCCEEEEECEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCC
TIVAQQPTAGMATPWAQPAAGPSAATGRGPVAPAWSSGSTAGSSSASGTGQPGRTAGPFI
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SDQPAGTTASAVADEPAGTHVSVVADPPAGTTASADVVPSPGTTTLTDQPDGTSVGNAPG
CCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
LPATESVPARAEPFAAEGESGLRGSPGDPDTWETAPIVADSGSAPAQSAAGAVADVPAQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCEECCCHHC
GVHASGDQTHSTGATGTTDQDQAPADASAQEEATSQSQPAPRYVNPLAVQVQLVQRHPMT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEHHCCCC
PRATGTATLNLRRGHLTLSLRGLPSPTALGRDGKSGRPFNAYRVWLVNQKTQMRTPAGYC
CCCCCEEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCHHHH
ERVWGENFRFEADGLPLNRSDTILITAEDRSVATSTGHPAPQVLIGTYDPRL
HHHCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA