| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892598
Identifier: 51892598
GI number: 51892598
Start: 1602906
End: 1603451
Strand: Reverse
Name: 51892598
Synonym: STH1460
Alternate gene names: NA
Gene position: 1603451-1602906 (Counterclockwise)
Preceding gene: 51892641
Following gene: 51892596
Centisome position: 44.96
GC content: 71.61
Gene sequence:
>546_bases ATGCACGCCGTCGTAACCGTCCTGCAGCCCGAGCTGTACCACCGGGTGGAAGCGCTCTGGGACGACCTCGAGCGCCGGTT CGGCCTCTCCGGCGCCCGGATCACGCCGATTCCCCACTTCTCCTGGCAGATCGCGCCCGAGTACGACTTCGCCCGGGTGG AAGATTGCCTGCAGACCGTGGCACAGGGGCTTGCACCGTTTGAGGTGGAGACGACCGGCATCGGGGTCTTCCGCGGGCCG GCGCCGGTGGTCTTCATCGACGTCCGGCGCACGCCGGCCCTGGACGCGCTGCACGTTCGGCTGTGGGAAGCGCTCCGGCC CCACCGGCGGCGGGAGAGCCCCTACTACAGCCCCGAGGCGTGGCGGCCCCACATCACGCTGGCGGAGAAGGACCTGAGCC CCGCCCACGTGGAGCGGGTGGTGTCACACCTGTCCCGCCTGCCGCTCCGCTGGACGGTGGCCGTGGACAACCTGGCGCTG ATCGAGCAGCCGCAGGGAGCGGTCGGCCGGCTGCGGTTCTCCCGGCGCTTCGGCGCAGCGGGATAG
Upstream 100 bases:
>100_bases CCGCGGGCAGGCCGGCGGCGGCGTCACGGCAGGAACTTCAGCAGGGCGCATCACGTCCCAGGAATCGCTATGGCCAGTTG GATCCAACCGGAGGGACAGC
Downstream 100 bases:
>100_bases GCCGCGCTCCGCTCAGCCCAGGGCCCTCAGAATCTCCACGGCCTCCAGCGTGTACTGCGGGCCGCACCCCGGGTAACGGC TGGACCAGGTGCCGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTVAQGLAPFEVETTGIGVFRGP APVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEAWRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLAL IEQPQGAVGRLRFSRRFGAAG
Sequences:
>Translated_181_residues MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTVAQGLAPFEVETTGIGVFRGP APVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEAWRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLAL IEQPQGAVGRLRFSRRFGAAG >Mature_181_residues MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTVAQGLAPFEVETTGIGVFRGP APVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEAWRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLAL IEQPQGAVGRLRFSRRFGAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20611; Mature: 20611
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTV CCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHH AQGLAPFEVETTGIGVFRGPAPVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEA HHCCCCCEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCC WRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLALIEQPQGAVGRLRFSRRFGAA CCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCHHHHHHHHHHCCCC G C >Mature Secondary Structure MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTV CCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHH AQGLAPFEVETTGIGVFRGPAPVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEA HHCCCCCEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCC WRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLALIEQPQGAVGRLRFSRRFGAA CCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCHHHHHHHHHHCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA