Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892598

Identifier: 51892598

GI number: 51892598

Start: 1602906

End: 1603451

Strand: Reverse

Name: 51892598

Synonym: STH1460

Alternate gene names: NA

Gene position: 1603451-1602906 (Counterclockwise)

Preceding gene: 51892641

Following gene: 51892596

Centisome position: 44.96

GC content: 71.61

Gene sequence:

>546_bases
ATGCACGCCGTCGTAACCGTCCTGCAGCCCGAGCTGTACCACCGGGTGGAAGCGCTCTGGGACGACCTCGAGCGCCGGTT
CGGCCTCTCCGGCGCCCGGATCACGCCGATTCCCCACTTCTCCTGGCAGATCGCGCCCGAGTACGACTTCGCCCGGGTGG
AAGATTGCCTGCAGACCGTGGCACAGGGGCTTGCACCGTTTGAGGTGGAGACGACCGGCATCGGGGTCTTCCGCGGGCCG
GCGCCGGTGGTCTTCATCGACGTCCGGCGCACGCCGGCCCTGGACGCGCTGCACGTTCGGCTGTGGGAAGCGCTCCGGCC
CCACCGGCGGCGGGAGAGCCCCTACTACAGCCCCGAGGCGTGGCGGCCCCACATCACGCTGGCGGAGAAGGACCTGAGCC
CCGCCCACGTGGAGCGGGTGGTGTCACACCTGTCCCGCCTGCCGCTCCGCTGGACGGTGGCCGTGGACAACCTGGCGCTG
ATCGAGCAGCCGCAGGGAGCGGTCGGCCGGCTGCGGTTCTCCCGGCGCTTCGGCGCAGCGGGATAG

Upstream 100 bases:

>100_bases
CCGCGGGCAGGCCGGCGGCGGCGTCACGGCAGGAACTTCAGCAGGGCGCATCACGTCCCAGGAATCGCTATGGCCAGTTG
GATCCAACCGGAGGGACAGC

Downstream 100 bases:

>100_bases
GCCGCGCTCCGCTCAGCCCAGGGCCCTCAGAATCTCCACGGCCTCCAGCGTGTACTGCGGGCCGCACCCCGGGTAACGGC
TGGACCAGGTGCCGTCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTVAQGLAPFEVETTGIGVFRGP
APVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEAWRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLAL
IEQPQGAVGRLRFSRRFGAAG

Sequences:

>Translated_181_residues
MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTVAQGLAPFEVETTGIGVFRGP
APVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEAWRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLAL
IEQPQGAVGRLRFSRRFGAAG
>Mature_181_residues
MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTVAQGLAPFEVETTGIGVFRGP
APVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEAWRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLAL
IEQPQGAVGRLRFSRRFGAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20611; Mature: 20611

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTV
CCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHH
AQGLAPFEVETTGIGVFRGPAPVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEA
HHCCCCCEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCC
WRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLALIEQPQGAVGRLRFSRRFGAA
CCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCHHHHHHHHHHCCCC
G
C
>Mature Secondary Structure
MHAVVTVLQPELYHRVEALWDDLERRFGLSGARITPIPHFSWQIAPEYDFARVEDCLQTV
CCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHH
AQGLAPFEVETTGIGVFRGPAPVVFIDVRRTPALDALHVRLWEALRPHRRRESPYYSPEA
HHCCCCCEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCC
WRPHITLAEKDLSPAHVERVVSHLSRLPLRWTVAVDNLALIEQPQGAVGRLRFSRRFGAA
CCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCHHHHHHHHHHCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA