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The map label for this gene is yfmC [H]

Identifier: 51892424

GI number: 51892424

Start: 1424960

End: 1426003

Strand: Reverse

Name: yfmC [H]

Synonym: STH1286

Alternate gene names: 51892424

Gene position: 1426003-1424960 (Counterclockwise)

Preceding gene: 51892425

Following gene: 51892423

Centisome position: 39.99

GC content: 71.17

Gene sequence:

>1044_bases
GTGCTGATCCGCAAGCTGATCCCGATCCGCAACTCCCGTCTGTTCCCCGTTCTCGCGCTCCTGCTCGCCGCTCTCCTCCT
GGCCGGCTGTACGAACGCCTCCGGCGGGGGCGCTGCGCCCGGCGGCAGCGGAAGCAGCCCCGAGCCTGCCGAGTCCTGGA
GCTTCGTGGACGACCGGGGCATCACGGTGACCCTGCCCGAGCGCCCGACCCGCGTGGTGGCGCAGTCCACGGCCGCGGCC
GCGCTCTGGTCCCTGGGCGTCGAGGTGGTGGGCGTCTTCGGCCCGCAGCGGCTGCCGGACGGGAGCAACGATCCCACCGT
CGGCGACGTCGACCTCAGCCGGGTGACCTCCCTGGGCGAGGCGTGGGGCGAGCTCGATCTGGAGAAGCTGGCGGCCCTGA
AGCCCGACCTCATCGTCAGCATCATGTACACGCCGCCGGAGCTCTGGTACGTGTTGCCCGACGTGGAGCCGCAGGTACGG
GCCATCGCCCCGACGGTGGGCATCACCGTGGGCCAGCGTTCCATCAAGGAGGCCATGCAGCGGTTCGAGGAGCTGGCCGG
GGCCCTGGGTGCGGACCTGAACGCCCCGCAGGTGGCGGCGGCCCGGCAGCGGTTCGAGGAGGCCAGCGAGGAGCTGCGGG
CGGCCCTGGCGGAGAAGCCCGGCCTGACGGCCATGTTCGGCGCCGGTTCCCTGGAGACGCTCTGGGTCAGCAACCCGCCC
TACTACGGCGATCTCTCCTACTTCCAGGAGCTCGGCATGCAGATCCTCGTGCCCGAGAACCCGGAGTCTTACTGGGAGGC
CCTGAGCTGGGAGCAGGCCCTCCGGTATCAGGCCGACGTGTTGTTCTACGACAGCCGCACTGAGGTGACGCAGCCGCCGG
AGCTGGCGGCGCAGGTGCCCACCTGGTCGCACATCCCCGCGGTGAAGGCCGGGCAGGTCTACCCGTGGGTGGCCGTTCCC
CCGTACAGCTGGGACGGTCTGGCGACCATCCTGGAGGACGTGGCGGCGGCGGTGCGCGAGGCGGATCCGCATGTCATCCC
GTAA

Upstream 100 bases:

>100_bases
CCTGGAGTCCGACGAGAACCGCATCGCCCGGCTGCTCGGGCGCCGCGCCGCCGGTGCACACGCACACTGATCCCCATCCC
CCGAGAGGAGGCCCTCTTCC

Downstream 100 bases:

>100_bases
CCCGGCGAAGGTCCATCGGCCGGCAGCCCTGCTGCTGCTGGCCGGCGTCCTTGTCCTCGTGGCGCTGTTGAGCCTGCGGG
TGGGCTCGATCCCGGTCTCC

Product: iron-siderophore uptake ABC system substrate-binding component

Products: NA

Alternate protein names: Ferric-citrate-binding protein [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLIRKLIPIRNSRLFPVLALLLAALLLAGCTNASGGGAAPGGSGSSPEPAESWSFVDDRGITVTLPERPTRVVAQSTAAA
ALWSLGVEVVGVFGPQRLPDGSNDPTVGDVDLSRVTSLGEAWGELDLEKLAALKPDLIVSIMYTPPELWYVLPDVEPQVR
AIAPTVGITVGQRSIKEAMQRFEELAGALGADLNAPQVAAARQRFEEASEELRAALAEKPGLTAMFGAGSLETLWVSNPP
YYGDLSYFQELGMQILVPENPESYWEALSWEQALRYQADVLFYDSRTEVTQPPELAAQVPTWSHIPAVKAGQVYPWVAVP
PYSWDGLATILEDVAAAVREADPHVIP

Sequences:

>Translated_347_residues
MLIRKLIPIRNSRLFPVLALLLAALLLAGCTNASGGGAAPGGSGSSPEPAESWSFVDDRGITVTLPERPTRVVAQSTAAA
ALWSLGVEVVGVFGPQRLPDGSNDPTVGDVDLSRVTSLGEAWGELDLEKLAALKPDLIVSIMYTPPELWYVLPDVEPQVR
AIAPTVGITVGQRSIKEAMQRFEELAGALGADLNAPQVAAARQRFEEASEELRAALAEKPGLTAMFGAGSLETLWVSNPP
YYGDLSYFQELGMQILVPENPESYWEALSWEQALRYQADVLFYDSRTEVTQPPELAAQVPTWSHIPAVKAGQVYPWVAVP
PYSWDGLATILEDVAAAVREADPHVIP
>Mature_347_residues
MLIRKLIPIRNSRLFPVLALLLAALLLAGCTNASGGGAAPGGSGSSPEPAESWSFVDDRGITVTLPERPTRVVAQSTAAA
ALWSLGVEVVGVFGPQRLPDGSNDPTVGDVDLSRVTSLGEAWGELDLEKLAALKPDLIVSIMYTPPELWYVLPDVEPQVR
AIAPTVGITVGQRSIKEAMQRFEELAGALGADLNAPQVAAARQRFEEASEELRAALAEKPGLTAMFGAGSLETLWVSNPP
YYGDLSYFQELGMQILVPENPESYWEALSWEQALRYQADVLFYDSRTEVTQPPELAAQVPTWSHIPAVKAGQVYPWVAVP
PYSWDGLATILEDVAAAVREADPHVIP

Specific function: Part of the ABC transporter complex yfmCDEF involved in citrate-dependent Fe(3+) import. Binds citrate-dependent Fe(3+) and delivers it to the surface of yfmDE (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37337; Mature: 37337

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRKLIPIRNSRLFPVLALLLAALLLAGCTNASGGGAAPGGSGSSPEPAESWSFVDDRG
CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ITVTLPERPTRVVAQSTAAAALWSLGVEVVGVFGPQRLPDGSNDPTVGDVDLSRVTSLGE
CEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AWGELDLEKLAALKPDLIVSIMYTPPELWYVLPDVEPQVRAIAPTVGITVGQRSIKEAMQ
HHCCCCHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCHHHHCCHHCEECCHHHHHHHHH
RFEELAGALGADLNAPQVAAARQRFEEASEELRAALAEKPGLTAMFGAGSLETLWVSNPP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCC
YYGDLSYFQELGMQILVPENPESYWEALSWEQALRYQADVLFYDSRTEVTQPPELAAQVP
CCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHCCC
TWSHIPAVKAGQVYPWVAVPPYSWDGLATILEDVAAAVREADPHVIP
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLIRKLIPIRNSRLFPVLALLLAALLLAGCTNASGGGAAPGGSGSSPEPAESWSFVDDRG
CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ITVTLPERPTRVVAQSTAAAALWSLGVEVVGVFGPQRLPDGSNDPTVGDVDLSRVTSLGE
CEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AWGELDLEKLAALKPDLIVSIMYTPPELWYVLPDVEPQVRAIAPTVGITVGQRSIKEAMQ
HHCCCCHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCHHHHCCHHCEECCHHHHHHHHH
RFEELAGALGADLNAPQVAAARQRFEEASEELRAALAEKPGLTAMFGAGSLETLWVSNPP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCC
YYGDLSYFQELGMQILVPENPESYWEALSWEQALRYQADVLFYDSRTEVTQPPELAAQVP
CCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHCCC
TWSHIPAVKAGQVYPWVAVPPYSWDGLATILEDVAAAVREADPHVIP
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]