| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892331
Identifier: 51892331
GI number: 51892331
Start: 1322877
End: 1323398
Strand: Reverse
Name: 51892331
Synonym: STH1193
Alternate gene names: NA
Gene position: 1323398-1322877 (Counterclockwise)
Preceding gene: 51892332
Following gene: 51892323
Centisome position: 37.11
GC content: 69.54
Gene sequence:
>522_bases TTGGCAACCGTCTGCCGCGTCGACACGCTGTACCACTACCTGATGGGCGGTGACGAGAGCCTGCCCGGCATCCTCGACAA GGGCCTGCTGCCGGCCAGCGCCTTCCCCGAGTCCGAACGGTGGCAGAGGTTCGAGTCCTTCTACCGCTCCCTGTACGCCC AGTGGGCCGAGCCGCTCCTGGGGCCCTTCCGCAACTCGGGCGTCTACTTCACGCCCATCGACTTCCGGCTGCTCCCGGGC ACCTACCTCCACCGGCGGACCCGCATCGCGGTGCCGCTGTCGGAAATCCCGCTGGAGCAGGCGGTGCTGACCTACGAACT GGACGGCCGGCGCACGGTGGTGCCCCTGACCGCCGAGGCGCTGGAAGAGGCGGCCGCGCTCTGGACGGCTGACCTGGTGC GGGCGTGGTACGCCCGCAACCCGAACATGTCCTTTTACTATGTTCCCCAGGTGGCGGTGTTCCCCGACGGTGGCATCGCC GTCCACACCGCCTGGGTGGAGCGGGCCCCTGCCGAGGCGTGA
Upstream 100 bases:
>100_bases CCTGAGGCCGGGGGCCGAAGCCCCCGGCCTCAAATCGTACCTGAGTACGAAGGAACCGGAAAAACCGCCGTCGTACAGGT TCTTGCGAGGTGAGGAAACT
Downstream 100 bases:
>100_bases CGCCGCGGGCGGCCGCCGTCACGGAGACGGATCGGCCGACGCCGGGAAGCGGGTCAGGCCCAGGTCGGTGGCCAGGGCGT CGAGTGGCACGTCGTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MATVCRVDTLYHYLMGGDESLPGILDKGLLPASAFPESERWQRFESFYRSLYAQWAEPLLGPFRNSGVYFTPIDFRLLPG TYLHRRTRIAVPLSEIPLEQAVLTYELDGRRTVVPLTAEALEEAAALWTADLVRAWYARNPNMSFYYVPQVAVFPDGGIA VHTAWVERAPAEA
Sequences:
>Translated_173_residues MATVCRVDTLYHYLMGGDESLPGILDKGLLPASAFPESERWQRFESFYRSLYAQWAEPLLGPFRNSGVYFTPIDFRLLPG TYLHRRTRIAVPLSEIPLEQAVLTYELDGRRTVVPLTAEALEEAAALWTADLVRAWYARNPNMSFYYVPQVAVFPDGGIA VHTAWVERAPAEA >Mature_172_residues ATVCRVDTLYHYLMGGDESLPGILDKGLLPASAFPESERWQRFESFYRSLYAQWAEPLLGPFRNSGVYFTPIDFRLLPGT YLHRRTRIAVPLSEIPLEQAVLTYELDGRRTVVPLTAEALEEAAALWTADLVRAWYARNPNMSFYYVPQVAVFPDGGIAV HTAWVERAPAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19568; Mature: 19437
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVCRVDTLYHYLMGGDESLPGILDKGLLPASAFPESERWQRFESFYRSLYAQWAEPLL CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GPFRNSGVYFTPIDFRLLPGTYLHRRTRIAVPLSEIPLEQAVLTYELDGRRTVVPLTAEA CHHCCCCEEECCCCEEECCCHHHHCCEEEECCHHHCCHHHEEEEEEECCCEEEEEECHHH LEEAAALWTADLVRAWYARNPNMSFYYVPQVAVFPDGGIAVHTAWVERAPAEA HHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEEHHHHCCCCCC >Mature Secondary Structure ATVCRVDTLYHYLMGGDESLPGILDKGLLPASAFPESERWQRFESFYRSLYAQWAEPLL CCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GPFRNSGVYFTPIDFRLLPGTYLHRRTRIAVPLSEIPLEQAVLTYELDGRRTVVPLTAEA CHHCCCCEEECCCCEEECCCHHHHCCEEEECCHHHCCHHHEEEEEEECCCEEEEEECHHH LEEAAALWTADLVRAWYARNPNMSFYYVPQVAVFPDGGIAVHTAWVERAPAEA HHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEEHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA