Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892323

Identifier: 51892323

GI number: 51892323

Start: 1315297

End: 1315806

Strand: Reverse

Name: 51892323

Synonym: STH1185

Alternate gene names: NA

Gene position: 1315806-1315297 (Counterclockwise)

Preceding gene: 51892331

Following gene: 51892317

Centisome position: 36.9

GC content: 66.08

Gene sequence:

>510_bases
GTGGCTCTCTCTTCTATTCACGCCGCTCAGGCCGGCTCCTCGATCCGCCCGACCTGGTCCAACATCGCATTCAACTCTGC
AGCCGTGGCGGGGTCGATCAGGTTAGCCCGCAGTGCCCCACCGAGCTTCACACGGAGGGAGGCCGCCGCACAGCGGGCCG
AGAACTGGCCGTCCCTCGCGGCAACGTGGGGAATGGATTCGACTTGGTACCGCAGCCAGACCGCGAGAGACATCGGGACG
TCTGATCTTTCACGCGCCCTGCTCACCATGCGCCCGCTCATCTCTGACGCCACCTTTCCTGGGCTTTTACCCTATACACG
CACGCGGTGGGCAAAAGGTTCGATACGCGCCGACCAAGTCTCGGCCGACCCGCCGGAACCGTGGTTCCAGCGGGTCGGCC
GCACGCAGGCCACCTGCCGGGAGCTGCGCCCGGGCGCTACTCGGCGGAGCCGCTCGACAGGATCACCAGCTCGGTGGTGC
TGCGCAGCTTGCTCCCAAAGTACACCATGA

Upstream 100 bases:

>100_bases
ACCTACGAGCCGATCTACGGCGAATATTCCTTAGTGTTCGGCGCAGAGAGAATGGTTCCTCCTGGAATAAAGGGAAAGGC
CACCTCGGGGCAGACCCGAG

Downstream 100 bases:

>100_bases
TCTTGAAGATCCCGCCGTTGCGCATCGCCGCAAACTGGGCAGTGTCCAACGGTAGCACGTAGATGCCATCCTCGTAGCGG
ATGGGATTGCCGTAACCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MALSSIHAAQAGSSIRPTWSNIAFNSAAVAGSIRLARSAPPSFTRREAAAQRAENWPSLAATWGMDSTWYRSQTARDIGT
SDLSRALLTMRPLISDATFPGLLPYTRTRWAKGSIRADQVSADPPEPWFQRVGRTQATCRELRPGATRRSRSTGSPARWC
CAACSQSTP

Sequences:

>Translated_169_residues
MALSSIHAAQAGSSIRPTWSNIAFNSAAVAGSIRLARSAPPSFTRREAAAQRAENWPSLAATWGMDSTWYRSQTARDIGT
SDLSRALLTMRPLISDATFPGLLPYTRTRWAKGSIRADQVSADPPEPWFQRVGRTQATCRELRPGATRRSRSTGSPARWC
CAACSQSTP
>Mature_168_residues
ALSSIHAAQAGSSIRPTWSNIAFNSAAVAGSIRLARSAPPSFTRREAAAQRAENWPSLAATWGMDSTWYRSQTARDIGTS
DLSRALLTMRPLISDATFPGLLPYTRTRWAKGSIRADQVSADPPEPWFQRVGRTQATCRELRPGATRRSRSTGSPARWCC
AACSQSTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18383; Mature: 18252

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSSIHAAQAGSSIRPTWSNIAFNSAAVAGSIRLARSAPPSFTRREAAAQRAENWPSLA
CCCCHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHH
ATWGMDSTWYRSQTARDIGTSDLSRALLTMRPLISDATFPGLLPYTRTRWAKGSIRADQV
HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCC
SADPPEPWFQRVGRTQATCRELRPGATRRSRSTGSPARWCCAACSQSTP
CCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALSSIHAAQAGSSIRPTWSNIAFNSAAVAGSIRLARSAPPSFTRREAAAQRAENWPSLA
CCCHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHH
ATWGMDSTWYRSQTARDIGTSDLSRALLTMRPLISDATFPGLLPYTRTRWAKGSIRADQV
HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCC
SADPPEPWFQRVGRTQATCRELRPGATRRSRSTGSPARWCCAACSQSTP
CCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA