Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is fbpB [H]

Identifier: 51892293

GI number: 51892293

Start: 1284828

End: 1286486

Strand: Reverse

Name: fbpB [H]

Synonym: STH1155

Alternate gene names: 51892293

Gene position: 1286486-1284828 (Counterclockwise)

Preceding gene: 51892294

Following gene: 51892292

Centisome position: 36.08

GC content: 66.85

Gene sequence:

>1659_bases
GTGATGGCGGGCGCGCGGTTCTGGCGGAAGTGGACGTTCTGGCACTGGGTGACCGCAGTCTCGCTGCTCGTCCTGGCGGT
GGTGCTGGTCTACCCGGTGGGCCAGCTGCTGATCAAGTCCTTCGTCGCCAAGGACGGCGGCTTCACCCTGAAGAACTACG
TCACCTTCCTGAGCAAGCGATACTACCGGCTGGCCCTGACCAACAGCCTCTGGGTCTGCACGGTCTCCACGATCATCGCC
ACGGCCATCGGCGTCCCCATGGCCTTCCTGCTGACCCGGTACCGGCTGCCGGGGAAGCCCCTCATCCGCACCCTGATCAT
CCTGTCGCTGCTCTCGCCGCCCTTCATCGGCACGTATTCCTGGATCGTGCTCCTGGGGCGGGCGGGCATCATCACCCGGG
CCATGGAGGCCATCGGGATCACGCTCCCCACCATCTACGGCCCCCGGGGGATCATCCTGGTGTTCTCCCTCCACTTCTTC
CCCTACGTCTACCTGTTCACGTCCGCGGCCCTGCAGTCCATCGACCGGTCGCTGGAAGAGGCCGCCGCGAACCTGGGCGT
GAACGGCTGGACCCGCTTCCGCACCGTCACCCTGCCCCTGGTGCTGCCGGCGATCTCCGCCGGCGCCCTGATGGCGTTCA
TGTCCGCGCTGGCCGACTTCGGCACGCCGCAGCTCATCGGCGAGGGCTTCCAGCTCCTGCCCATCGCCGCCTACTCCGAG
TACATGAACGAGATCGGCGGCAACCCCGGCATGGCCGGCGCCCTGTCGATGGGGCTGGTGGTCATCTCGGCCGTGGCCCT
CTTCCTGCAGCGGTGGGTCACGCGCAGGAGCTTCTCCATGAGCAGCCTGCGGCCGCCTGAGGTGGTCGACCTGCCGCTGG
GCCGGAAGATCCTCGCCACCGCCTTCTGCTACCTGGTGGTGCTGGTGGCGATCCTGCCCCAGGTGGTCGTGGTCGTCTCC
TCGTTCCGCAAGACCAAGGGGCCGATCTTCCTGAGCGAGTTCGGACTGGACAACTACATCACCATCTTCGACCGGGTGCC
CGGGGCGGTGGCCAATACGTTCCGGCTCTCCACCGTGGCCATCGTCATCATGGTGATTGCCGGCCTGCTGATGGCCTACG
TGATCACCCGGCGGCGCAGCGCGGCCACGGCGGCGCTGGACGTCATGCTCCTGGTCCCCTACGTGCTGCCGGGCACGGTC
ATCGGCATCGCGCTGGTCACCGCCTTCAACCGGCCGCCGCTGGTCCTCACCGGCACGGCGACCATCCTCATCCTCTCCTA
CGTGATCCGCAAGATCAGCTACACCGTCCGCTCCGCCTCGTCGGTGCTGACCTCCCTCGACCCCTCGCTGGAGGAAGCTT
CCATTAACCTGGGCGTGGGGCCGGTGGCCTCGTTCTTCCGGGTGACGGCGCCGCTGGTCTTCAAGGGCGTGCTCGCAGGC
GCGGTGCTCTCGTGGGTGACCACCATCAACGAGCTCTCCAGCACCATCATCCTCTACCATGCGGGCACGATCACCATGCC
GGTGGCCATCTACTCGCAGGTCATCTCCGACAACTTCGGCCTGGCCGCCGCACTCAGCACGATCCTGACCCTGGCGACGG
TGGTCTCGCTCTGGCTGTTCAACAAGCTGGCGGGCAAGGACAGCGGCCTGCTGATGTAG

Upstream 100 bases:

>100_bases
TCCCCAACGAGATCGACCCGCCCCGGGTCGGCGAGCAGGCCACCTTCGGCTTCCGGCGCGCCGCGGCGGCGGTCTTCGGC
GCACAGGGCGAGGTGTTGCC

Downstream 100 bases:

>100_bases
CTCTGACAGCGGGGGCCCGATTCTGCGGCGCGCAACCGCGCCGCCACACAGGAGGTCGTTCACGTGGCGATCAAGGCGGT
CATCTTTGACCTGGGCGGCG

Product: ABC transporter permease protein

Products: ADP; phosphate; MoO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKRYYRLALTNSLWVCTVSTIIA
TAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYSWIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFF
PYVYLFTSAALQSIDRSLEEAAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE
YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILATAFCYLVVLVAILPQVVVVVS
SFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVAIVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTV
IGIALVTAFNRPPLVLTGTATILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG
AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLFNKLAGKDSGLLM

Sequences:

>Translated_552_residues
MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKRYYRLALTNSLWVCTVSTIIA
TAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYSWIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFF
PYVYLFTSAALQSIDRSLEEAAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE
YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILATAFCYLVVLVAILPQVVVVVS
SFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVAIVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTV
IGIALVTAFNRPPLVLTGTATILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG
AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLFNKLAGKDSGLLM
>Mature_552_residues
MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKRYYRLALTNSLWVCTVSTIIA
TAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYSWIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFF
PYVYLFTSAALQSIDRSLEEAAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE
YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILATAFCYLVVLVAILPQVVVVVS
SFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVAIVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTV
IGIALVTAFNRPPLVLTGTATILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG
AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLFNKLAGKDSGLLM

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI1786980, Length=213, Percent_Identity=32.3943661971831, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787713, Length=236, Percent_Identity=30.5084745762712, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787368, Length=230, Percent_Identity=28.2608695652174, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787369, Length=226, Percent_Identity=26.5486725663717, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787080, Length=182, Percent_Identity=27.4725274725275, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788764, Length=147, Percent_Identity=29.9319727891156, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 59695; Mature: 59695

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YYRLALTNSLWVCTVSTIIATAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYS
HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHH
WIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFFPYVYLFTSAALQSIDRSLEE
HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILAT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHH
AFCYLVVLVAILPQVVVVVSSFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHCCCCHHHHHHHHHHHH
IVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTVIGIALVTAFNRPPLVLTGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHH
TILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLF
HHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
NKLAGKDSGLLM
HHHCCCCCCCCC
>Mature Secondary Structure
MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YYRLALTNSLWVCTVSTIIATAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYS
HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHH
WIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFFPYVYLFTSAALQSIDRSLEE
HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILAT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHH
AFCYLVVLVAILPQVVVVVSSFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHCCCCHHHHHHHHHHHH
IVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTVIGIALVTAFNRPPLVLTGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHH
TILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLF
HHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
NKLAGKDSGLLM
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; MoO42- [Periplasm]; H2O [C]

Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8807793 [H]