| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892197
Identifier: 51892197
GI number: 51892197
Start: 1172491
End: 1173081
Strand: Reverse
Name: 51892197
Synonym: STH1059
Alternate gene names: NA
Gene position: 1173081-1172491 (Counterclockwise)
Preceding gene: 51892201
Following gene: 51892196
Centisome position: 32.9
GC content: 69.88
Gene sequence:
>591_bases ATGAGCACCCCGGACACCGCGCCACAGCCGGAAAACCACGCACAACGCCACGGACTGGCCGTATCCCTCCTGCGCGGGCT GGGCCTGGTGGTGCTGATGGCGGCCATCAGCGCGGGTACCGCTTTCCTCATCGTCGAGCTGCGGATGAATGCCATCGCCG CCGCGACCGCGGCGGCGGAGGACGACCTCACGGCGCTGCGCCAGGCCACCCTGGACGAGGTAGCCGCCCTGCGGGCCGAG CTGGCAAGCACTACGGCGGAGCTTCAGGCGGAGGTGCGGCGGCAGCGGGAAGAGCTCGAGGCGGAGATGAAGCGGGTCCA GGAGGCCGCGGTGGCCGCCGGCGTGCTGCTGGAACAGGAAGGCGAGCTCACCGGCCTCGAGGCCCGGCTGAAGGAGATCG AGACGCTGAAGCTGGACCTGAAGAGCGCCCGCGAGGAAATGGACGCCAAGCTGCAGGCCCTGGAGGCGTCACTGAAGGAC CAGCTGGCCTCGTCGGAGCAGGAGACGGCCGCCGCGCTGTCGCTGGAGATGTCGGTGAAGGGGCTCCTGATCAAGGCCCA GGGGGAGGTCCTGCTCGCCCAGGTCTACTAG
Upstream 100 bases:
>100_bases CTCGTTACCGCGATAAAGCGCGTATACGATTTAACCCAATTTCGCCAAAGATCCGCCTGTACCTGCTAGTCGTTATACAA AATTGAAAGGAGTTGGCGCA
Downstream 100 bases:
>100_bases GCGGAGGGGAACCGCGGCCTCGCCCGGGACGAGCTGGCCATCGCCCACCAGACGCTGCTGGACGCGCTGCAGGCCGCCCC CACCGCGGACAAGCAGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSTPDTAPQPENHAQRHGLAVSLLRGLGLVVLMAAISAGTAFLIVELRMNAIAAATAAAEDDLTALRQATLDEVAALRAE LASTTAELQAEVRRQREELEAEMKRVQEAAVAAGVLLEQEGELTGLEARLKEIETLKLDLKSAREEMDAKLQALEASLKD QLASSEQETAAALSLEMSVKGLLIKAQGEVLLAQVY
Sequences:
>Translated_196_residues MSTPDTAPQPENHAQRHGLAVSLLRGLGLVVLMAAISAGTAFLIVELRMNAIAAATAAAEDDLTALRQATLDEVAALRAE LASTTAELQAEVRRQREELEAEMKRVQEAAVAAGVLLEQEGELTGLEARLKEIETLKLDLKSAREEMDAKLQALEASLKD QLASSEQETAAALSLEMSVKGLLIKAQGEVLLAQVY >Mature_195_residues STPDTAPQPENHAQRHGLAVSLLRGLGLVVLMAAISAGTAFLIVELRMNAIAAATAAAEDDLTALRQATLDEVAALRAEL ASTTAELQAEVRRQREELEAEMKRVQEAAVAAGVLLEQEGELTGLEARLKEIETLKLDLKSAREEMDAKLQALEASLKDQ LASSEQETAAALSLEMSVKGLLIKAQGEVLLAQVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20911; Mature: 20780
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPDTAPQPENHAQRHGLAVSLLRGLGLVVLMAAISAGTAFLIVELRMNAIAAATAAAE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHH DDLTALRQATLDEVAALRAELASTTAELQAEVRRQREELEAEMKRVQEAAVAAGVLLEQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GELTGLEARLKEIETLKLDLKSAREEMDAKLQALEASLKDQLASSEQETAAALSLEMSVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC GLLIKAQGEVLLAQVY EEEEEECCCEEEEECC >Mature Secondary Structure STPDTAPQPENHAQRHGLAVSLLRGLGLVVLMAAISAGTAFLIVELRMNAIAAATAAAE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHH DDLTALRQATLDEVAALRAELASTTAELQAEVRRQREELEAEMKRVQEAAVAAGVLLEQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GELTGLEARLKEIETLKLDLKSAREEMDAKLQALEASLKDQLASSEQETAAALSLEMSVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC GLLIKAQGEVLLAQVY EEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA