| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891998
Identifier: 51891998
GI number: 51891998
Start: 970406
End: 971437
Strand: Reverse
Name: 51891998
Synonym: STH860
Alternate gene names: NA
Gene position: 971437-970406 (Counterclockwise)
Preceding gene: 51892001
Following gene: 51891997
Centisome position: 27.24
GC content: 65.31
Gene sequence:
>1032_bases ATGCGACTGCGGCTGGTGACGGTCCCGGATCGACTCTGGGCCGACCGTTCCATACCGGAAGGCGCCAAGCTAGTGTGGTG TTACGTTTCCGCCCTCTGCCACCTGCGGAGCGAGTTTACGTATAAGGAGCTGCGGGAGGGCGCCGGTATCAGCCTCCCCA GCCTGCACAAGTATCTGTCTGTGCTGTCCCGGGCAGGATGGCTGAACTGCGCGCGGATAAGCCTTCGCGTCGTCCGCTGC GAGATCACCGGGCCCATGGGTGGCCCGCGCCTGGTTCTGCCCACGGATATCCTCTTCGAGAGGCGTCTCCCACGGGGTGC CTGCTGGACGTGGGGCCTGATCGGCCGGATGGGCGGTCGGTTCGAGTACACGGAGCTGCGGAAGGCCACGGGATACAGTC AGGATACCCTGAGCAAGCACGTCAGGGCGTTGATTGCGCAGCGCTGGCTCGTAGGCGGCCCTCACCGGAAGGCACGGCGC GTGATCTACAACGTCCGCGGAGCCAACCCGCGCGCCATTCAACGCGCACAAGAACTGCAGGAACTGGAGCGCGGCCTCCA GGTAGCCAGGAGCACACCCGGGTACTCGCAGGGCCAGTACATCCTCGCGCGCCTGATTCGGGAGATGTACCCTGGCGTGG AGGTTCTGGAGAATGCAGAGATCACCGGCCTGGACAACGTCGAGACCCGCGGGCGCCTGCAAGTCGACGTGTACATGCCG GACCAGAAACTGGCCATCGAGTTTCAGGGCCATCAGCACGCCGGCCCGACCGAACGTTATCCCAGCGTCGAGGAGTTCCG TGCTCGGCGCAGGCGGGATCTCATCAAGCGGGGACTCTGCCTGGAGAAGGGCATCGAGTTAATTTCGCTGTGGCCGCAGG ATCTGAGTTGCGCAGGGATCGCGCGGGCGCTCGGCCACCGCCTGCACTTCGCGGGAGCCAGAGAGGACCGCTGGCACGTC GCTCGCTTTCTCGAGCAGCGGGCGGAGTGGTACCGGAAAGCCGCGGCCAGGAGCCAATGCTCGTCGTTCTGA
Upstream 100 bases:
>100_bases AGGGATGCAAGCGAACAGAGGGAAGATCTGAGCGAACATTCGCTCGATCTAAGGAAGGAATCCCATCCAGGTATGGCGAA TCTTTCCATCGGTGATGCGC
Downstream 100 bases:
>100_bases CAGCGCCGGCCGCGCAACGGAACGCTCGTCGCACGGCCCCTTGAAGCCGACGCGCGGCCAGGGAGCAAACGTGCTTATGG GCCTGCGCGGCGATTCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLSVLSRAGWLNCARISLRVVRC EITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGRFEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARR VIYNVRGANPRAIQRAQELQELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGIARALGHRLHFAGAREDRWHV ARFLEQRAEWYRKAAARSQCSSF
Sequences:
>Translated_343_residues MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLSVLSRAGWLNCARISLRVVRC EITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGRFEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARR VIYNVRGANPRAIQRAQELQELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGIARALGHRLHFAGAREDRWHV ARFLEQRAEWYRKAAARSQCSSF >Mature_343_residues MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLSVLSRAGWLNCARISLRVVRC EITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGRFEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARR VIYNVRGANPRAIQRAQELQELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGIARALGHRLHFAGAREDRWHV ARFLEQRAEWYRKAAARSQCSSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39340; Mature: 39340
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLS CEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHH VLSRAGWLNCARISLRVVRCEITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGR HHHHCCCCEEEEEEEEEEEEEEECCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHCCCC FEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARRVIYNVRGANPRAIQRAQELQ CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH ELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEC DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGI CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHEEECCCCCHHHHH ARALGHRLHFAGAREDRWHVARFLEQRAEWYRKAAARSQCSSF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLS CEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHH VLSRAGWLNCARISLRVVRCEITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGR HHHHCCCCEEEEEEEEEEEEEEECCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHCCCC FEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARRVIYNVRGANPRAIQRAQELQ CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH ELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEC DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGI CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHEEECCCCCHHHHH ARALGHRLHFAGAREDRWHVARFLEQRAEWYRKAAARSQCSSF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA