| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is mtnA1 [H]
Identifier: 51891954
GI number: 51891954
Start: 915862
End: 916911
Strand: Reverse
Name: mtnA1 [H]
Synonym: STH816
Alternate gene names: 51891954
Gene position: 916911-915862 (Counterclockwise)
Preceding gene: 51891965
Following gene: 51891953
Centisome position: 25.71
GC content: 71.9
Gene sequence:
>1050_bases GTGAACGGACCGAAGCTGCCGCTGCTGACCAACCGGGCCGACACGCTGAAGTACGAGGACGGGGTGGTGCGGATCCTCGA CCGGCGCCGGCTGCCGGAGGAGACCGTCTTCGTGGACTGCCGGGACTACCGGGAGGTGGCCCGGGCCATCGTGGACATGG TGATCCAGGGGGCGCCGCCCCTCGCCTACGCCGCCGGTTACGGCCTGGCCCTGGCCTGCCGCCAGAGCCGGGATCTCCCC GCGCCGGAGCGCCGCCGGGCCCTGGAGCAGGCCCACCGGGAGCTGCGGGCCACCCGGCCCACGGGGGCCGACATCTTCCC GCTGCTGGACCGGGCCCTGGCCCTGGCGCTGGCCGCCCTCGAAGAGGGGCGCGACCCGGAGGCGGCGGTGAGGGAGTTCG TGGACGGGCAGATCCGGGCCGGCGACCGGGCCGCCCGGCTGTGCGGTTCCCACGCCGCCGGCCTGCTGGAGGACGGCGAC CGGATCCTCACCCACTGCTTCGCAGGCGCCGCCCTGAACTACATGCTCTACTTCGCCCTGAAGGCGGGGAAGCGGATCGA GCTTATCGCCACCGAGACCCGGCCTTACCTGCAGGGAGCCAGGCTCACCGCCGCCCAGGCCCGGGAGATCGGCGTGCCGG TGACCCTGGTGACCGACAACATGCCGGGATACCTGTTCTACCGGGGGATGATCACCAAGTACGTGACCGCGGCCGACTCG ATCTCCCTGGACGGGCACGTCTCCAACAAGATCGGCACCTTCCAGTACGCGGTGCTGGCGCACCACTTCGGCGTGCCCTT CATGGTGCTGGGCTACGATGGCCCCGACCGCGAGCGGGCCACCGCGGCGGACATCCCCATCGAGGAGCGGGACCCGGAGG AGGTCTTCTACTGCCGCGGCGTGCGCACCGCCGCGGAGGGGATCCGGGGGTACTACCCGGCCTTTGACATCACGCCGCCG CAGTACGTGAGCGTGATCGCCACGGACCGGGGGCTGTTCTCCCCCTGGAACGTGCGGGACTACTTCAGGGCCCCGGAGCC GGAGGAGTAG
Upstream 100 bases:
>100_bases CGTGGAGGGGCAATGTCCGTTTTGTGACACTTATCGACCGGACCGGCGCCCAGCGCTGCGGCATGATGGGAAGGAGACAG AACCCAGGGGAGGAAAGGCC
Downstream 100 bases:
>100_bases CATGGTCGATACGGTCATCATCGGGGGTACGGCGGCGTACCACCTGCAGTTCGACCCGGGCTGGACGGAGCGGACCGTGG AGACCCCCTTCGGCCCGGCC
Product: translation initiation factor eIF-2B alpha subunit
Products: NA
Alternate protein names: M1Pi 1; MTR-1-P isomerase 1; S-methyl-5-thioribose-1-phosphate isomerase 1 [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNGPKLPLLTNRADTLKYEDGVVRILDRRRLPEETVFVDCRDYREVARAIVDMVIQGAPPLAYAAGYGLALACRQSRDLP APERRRALEQAHRELRATRPTGADIFPLLDRALALALAALEEGRDPEAAVREFVDGQIRAGDRAARLCGSHAAGLLEDGD RILTHCFAGAALNYMLYFALKAGKRIELIATETRPYLQGARLTAAQAREIGVPVTLVTDNMPGYLFYRGMITKYVTAADS ISLDGHVSNKIGTFQYAVLAHHFGVPFMVLGYDGPDRERATAADIPIEERDPEEVFYCRGVRTAAEGIRGYYPAFDITPP QYVSVIATDRGLFSPWNVRDYFRAPEPEE
Sequences:
>Translated_349_residues MNGPKLPLLTNRADTLKYEDGVVRILDRRRLPEETVFVDCRDYREVARAIVDMVIQGAPPLAYAAGYGLALACRQSRDLP APERRRALEQAHRELRATRPTGADIFPLLDRALALALAALEEGRDPEAAVREFVDGQIRAGDRAARLCGSHAAGLLEDGD RILTHCFAGAALNYMLYFALKAGKRIELIATETRPYLQGARLTAAQAREIGVPVTLVTDNMPGYLFYRGMITKYVTAADS ISLDGHVSNKIGTFQYAVLAHHFGVPFMVLGYDGPDRERATAADIPIEERDPEEVFYCRGVRTAAEGIRGYYPAFDITPP QYVSVIATDRGLFSPWNVRDYFRAPEPEE >Mature_349_residues MNGPKLPLLTNRADTLKYEDGVVRILDRRRLPEETVFVDCRDYREVARAIVDMVIQGAPPLAYAAGYGLALACRQSRDLP APERRRALEQAHRELRATRPTGADIFPLLDRALALALAALEEGRDPEAAVREFVDGQIRAGDRAARLCGSHAAGLLEDGD RILTHCFAGAALNYMLYFALKAGKRIELIATETRPYLQGARLTAAQAREIGVPVTLVTDNMPGYLFYRGMITKYVTAADS ISLDGHVSNKIGTFQYAVLAHHFGVPFMVLGYDGPDRERATAADIPIEERDPEEVFYCRGVRTAAEGIRGYYPAFDITPP QYVSVIATDRGLFSPWNVRDYFRAPEPEE
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=348, Percent_Identity=32.4712643678161, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI23943880, Length=330, Percent_Identity=30.6060606060606, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI4503503, Length=203, Percent_Identity=28.0788177339901, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17557462, Length=343, Percent_Identity=27.4052478134111, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17557123, Length=274, Percent_Identity=26.2773722627737, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325375, Length=389, Percent_Identity=25.4498714652956, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322878, Length=265, Percent_Identity=23.3962264150943, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357667, Length=353, Percent_Identity=31.728045325779, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24651647, Length=353, Percent_Identity=31.728045325779, Blast_Score=138, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 38704; Mature: 38704
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPKLPLLTNRADTLKYEDGVVRILDRRRLPEETVFVDCRDYREVARAIVDMVIQGAPP CCCCCCCEECCCCCCEEECCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC LAYAAGYGLALACRQSRDLPAPERRRALEQAHRELRATRPTGADIFPLLDRALALALAAL HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EEGRDPEAAVREFVDGQIRAGDRAARLCGSHAAGLLEDGDRILTHCFAGAALNYMLYFAL HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHH KAGKRIELIATETRPYLQGARLTAAQAREIGVPVTLVTDNMPGYLFYRGMITKYVTAADS HCCCEEEEEEECCCCHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC ISLDGHVSNKIGTFQYAVLAHHFGVPFMVLGYDGPDRERATAADIPIEERDPEEVFYCRG CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEECC VRTAAEGIRGYYPAFDITPPQYVSVIATDRGLFSPWNVRDYFRAPEPEE HHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MNGPKLPLLTNRADTLKYEDGVVRILDRRRLPEETVFVDCRDYREVARAIVDMVIQGAPP CCCCCCCEECCCCCCEEECCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC LAYAAGYGLALACRQSRDLPAPERRRALEQAHRELRATRPTGADIFPLLDRALALALAAL HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EEGRDPEAAVREFVDGQIRAGDRAARLCGSHAAGLLEDGDRILTHCFAGAALNYMLYFAL HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHH KAGKRIELIATETRPYLQGARLTAAQAREIGVPVTLVTDNMPGYLFYRGMITKYVTAADS HCCCEEEEEEECCCCHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC ISLDGHVSNKIGTFQYAVLAHHFGVPFMVLGYDGPDRERATAADIPIEERDPEEVFYCRG CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEECC VRTAAEGIRGYYPAFDITPPQYVSVIATDRGLFSPWNVRDYFRAPEPEE HHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA