| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is cotH [H]
Identifier: 51891921
GI number: 51891921
Start: 880589
End: 881545
Strand: Reverse
Name: cotH [H]
Synonym: STH783
Alternate gene names: 51891921
Gene position: 881545-880589 (Counterclockwise)
Preceding gene: 51891923
Following gene: 51891913
Centisome position: 24.72
GC content: 72.0
Gene sequence:
>957_bases GTGCGCATCCGCGGCGCACACTCCCGCAAGTTCCCCAAGCGGTCCCTGCAGGTGACCCTGCGCGGAGCGCGCCTGCCCGA CGAGCCCCCGGCCGGCCACACCGTGCAGCGCATCCACCTCAACGCCGACTTCGTCGACCCTACCCTCATGCGCTCGGCAC TGTCCTATACCCTCTTCCCGCTGCTGGGCGTGGACGCGCCCCGGTGGCGGCACGTGCTGCCCACCGTCAGCGGCGAGCCG GCCGGCCTGTACGTCGGACTCGAGTCGGTGGACCGGGACTTCTGCCTGCGCCGGGGCTGGCCCCCCGGGCCGATCTTTTA CGCGATCAACCGGAACGCCAACTTCGGCCTGATCAGTCCCTTCACCCGCACGCTGAAGGAGCCCCTGGACAGGGGCTACC ACCCGGTGGAGGGCGCCGACACGGAGCCGATCCGGCAGATGCTCCTGGACCTGAACCTGGCGGACGACGCGTCGTTCCTG CAGGCGGCCGCCCGGTGGTTCGACCTGGAGCGGTACGTCCACTGGGTGATCGGCGCGGTCTTCGTCGGCAACCGCGACGG CTTCGTGCACAACTACGCCCTTTACCTGGAGCCTGGCGAGCGCCGGTTCCGCATCATCCCGTGGGATTACGACGCCACCT GGGGCATCGACATCCACGGGCGGCCCGCCCGCCTGGACCGGGTGCCGGTGACCGGCTGGAACAAGCTCTCCTACCGGCTC TTCGCGCACCCGGAAGGGCGCCGCCGCTTCCGCCGGGCCTTCCTTCGCGCCCTGGACGGGCCGCTGGCCCCGGACAGCGT GCTGCCGCTCATCGACCGGCTGGCCTCCCAGGTGGAGCCCTGGCGGGAGCGGGATCCGTACCTGCGCCGTGCCGACTTCC CCCGGGAGGTCGAGCGGCTGCGCCGCTGGGCGGTCGAACGGCGGGCCGTGCTGCTCCGGGAGCTGGCCTCCCTGTGA
Upstream 100 bases:
>100_bases CTGCGATCTTGCTCTGGGGCCGGACCCGTGGCCCCGGCTGGCAGAGGGAAGCCTGACCGGCACGCTCCGCTGGAACCACG GGCCGGAGCTGCCGGTCTCC
Downstream 100 bases:
>100_bases CGGAGCCGCACAGCGAAGGGGCTACCCGCCGTCATCCCGGATGAATCGGGTCATCCGCGATGACGGGGATAGCCCCCCGA CGGCTACTGGATGATGGTGA
Product: spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRIRGAHSRKFPKRSLQVTLRGARLPDEPPAGHTVQRIHLNADFVDPTLMRSALSYTLFPLLGVDAPRWRHVLPTVSGEP AGLYVGLESVDRDFCLRRGWPPGPIFYAINRNANFGLISPFTRTLKEPLDRGYHPVEGADTEPIRQMLLDLNLADDASFL QAAARWFDLERYVHWVIGAVFVGNRDGFVHNYALYLEPGERRFRIIPWDYDATWGIDIHGRPARLDRVPVTGWNKLSYRL FAHPEGRRRFRRAFLRALDGPLAPDSVLPLIDRLASQVEPWRERDPYLRRADFPREVERLRRWAVERRAVLLRELASL
Sequences:
>Translated_318_residues MRIRGAHSRKFPKRSLQVTLRGARLPDEPPAGHTVQRIHLNADFVDPTLMRSALSYTLFPLLGVDAPRWRHVLPTVSGEP AGLYVGLESVDRDFCLRRGWPPGPIFYAINRNANFGLISPFTRTLKEPLDRGYHPVEGADTEPIRQMLLDLNLADDASFL QAAARWFDLERYVHWVIGAVFVGNRDGFVHNYALYLEPGERRFRIIPWDYDATWGIDIHGRPARLDRVPVTGWNKLSYRL FAHPEGRRRFRRAFLRALDGPLAPDSVLPLIDRLASQVEPWRERDPYLRRADFPREVERLRRWAVERRAVLLRELASL >Mature_318_residues MRIRGAHSRKFPKRSLQVTLRGARLPDEPPAGHTVQRIHLNADFVDPTLMRSALSYTLFPLLGVDAPRWRHVLPTVSGEP AGLYVGLESVDRDFCLRRGWPPGPIFYAINRNANFGLISPFTRTLKEPLDRGYHPVEGADTEPIRQMLLDLNLADDASFL QAAARWFDLERYVHWVIGAVFVGNRDGFVHNYALYLEPGERRFRIIPWDYDATWGIDIHGRPARLDRVPVTGWNKLSYRL FAHPEGRRRFRRAFLRALDGPLAPDSVLPLIDRLASQVEPWRERDPYLRRADFPREVERLRRWAVERRAVLLRELASL
Specific function: Involved in the assembly of several proteins in the inner and outer layer of the spore coat. Stabilizes CotC and CotU in the mother cell compartment of sporulating cells and promotes the assembly of both early and late forms of CotC-related polypeptides o
COG id: COG5337
COG function: function code M; Spore coat assembly protein
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014867 [H]
Pfam domain/function: PF08757 CotH [H]
EC number: NA
Molecular weight: Translated: 36824; Mature: 36824
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRGAHSRKFPKRSLQVTLRGARLPDEPPAGHTVQRIHLNADFVDPTLMRSALSYTLFP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH LLGVDAPRWRHVLPTVSGEPAGLYVGLESVDRDFCLRRGWPPGPIFYAINRNANFGLISP HHCCCCCCHHHHCCCCCCCCCEEEEEHHHCCHHHHHHCCCCCCCEEEEEECCCCCCEECH FTRTLKEPLDRGYHPVEGADTEPIRQMLLDLNLADDASFLQAAARWFDLERYVHWVIGAV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FVGNRDGFVHNYALYLEPGERRFRIIPWDYDATWGIDIHGRPARLDRVPVTGWNKLSYRL EECCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE FAHPEGRRRFRRAFLRALDGPLAPDSVLPLIDRLASQVEPWRERDPYLRRADFPREVERL EECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHCCCCHHHHHHH RRWAVERRAVLLRELASL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIRGAHSRKFPKRSLQVTLRGARLPDEPPAGHTVQRIHLNADFVDPTLMRSALSYTLFP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH LLGVDAPRWRHVLPTVSGEPAGLYVGLESVDRDFCLRRGWPPGPIFYAINRNANFGLISP HHCCCCCCHHHHCCCCCCCCCEEEEEHHHCCHHHHHHCCCCCCCEEEEEECCCCCCEECH FTRTLKEPLDRGYHPVEGADTEPIRQMLLDLNLADDASFLQAAARWFDLERYVHWVIGAV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FVGNRDGFVHNYALYLEPGERRFRIIPWDYDATWGIDIHGRPARLDRVPVTGWNKLSYRL EECCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE FAHPEGRRRFRRAFLRALDGPLAPDSVLPLIDRLASQVEPWRERDPYLRRADFPREVERL EECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHCCCCHHHHHHH RRWAVERRAVLLRELASL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8755863; 8991897; 9353933; 9384377; 7814326; 10198031 [H]