Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

Click here to switch to the map view.

The map label for this gene is 51598693

Identifier: 51598693

GI number: 51598693

Start: 461737

End: 462036

Strand: Direct

Name: 51598693

Synonym: BG0446

Alternate gene names: NA

Gene position: 461737-462036 (Clockwise)

Preceding gene: 51598692

Following gene: 51598694

Centisome position: 51.06

GC content: 24.33

Gene sequence:

>300_bases
ATGAATGATTCTGCTTTTAAAAAAATAGGTAATGTGCTTAAAGATTATTTAGAATCTAATTTGCTTGTTAATAAAAAAAT
AAGTTCAAAATTATTGATTGCTGACAAATGGAATCAGATCTTTAAGACTTTATCAGATGATGTAAAATTTTTAGATTTGA
AAAATGAGCAGGTTCTTTTCCTTGAGGTAAGCAATTCAAGTATTTTGTATAGCATATCAATTAATAAGTCAAAGATAATA
AGGGAAATAAAAGAATTAACGAGGATTGCAATAATAGATATAAAAGTTTTAGTAAAGTGA

Upstream 100 bases:

>100_bases
TAGGTTAAAGTGAATTATTAATGTAATTTTAAATATTAAAACGAGCTTTTATAAAGCTTATTTTATATTGTTTTTTGCAT
TGCGGTATAAAAAAATTGTT

Downstream 100 bases:

>100_bases
TCATTATTGACAATCGCATTTATATACTATACCATTGTAGTGTTCAATTTGCAGCTTAGTAGCGGGAAATTGTTTTTAAT
GGAGGAGCGTTTTGAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNDSAFKKIGNVLKDYLESNLLVNKKISSKLLIADKWNQIFKTLSDDVKFLDLKNEQVLFLEVSNSSILYSISINKSKII
REIKELTRIAIIDIKVLVK

Sequences:

>Translated_99_residues
MNDSAFKKIGNVLKDYLESNLLVNKKISSKLLIADKWNQIFKTLSDDVKFLDLKNEQVLFLEVSNSSILYSISINKSKII
REIKELTRIAIIDIKVLVK
>Mature_99_residues
MNDSAFKKIGNVLKDYLESNLLVNKKISSKLLIADKWNQIFKTLSDDVKFLDLKNEQVLFLEVSNSSILYSISINKSKII
REIKELTRIAIIDIKVLVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11399; Mature: 11399

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSAFKKIGNVLKDYLESNLLVNKKISSKLLIADKWNQIFKTLSDDVKFLDLKNEQVLF
CCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCEEEE
LEVSNSSILYSISINKSKIIREIKELTRIAIIDIKVLVK
EEECCCEEEEEEECCHHHHHHHHHHHHHHHHEEEEEEEC
>Mature Secondary Structure
MNDSAFKKIGNVLKDYLESNLLVNKKISSKLLIADKWNQIFKTLSDDVKFLDLKNEQVLF
CCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCEEEE
LEVSNSSILYSISINKSKIIREIKELTRIAIIDIKVLVK
EEECCCEEEEEEECCHHHHHHHHHHHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8341609; 9403685 [H]