| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598687
Identifier: 51598687
GI number: 51598687
Start: 452371
End: 453084
Strand: Direct
Name: 51598687
Synonym: BG0440
Alternate gene names: NA
Gene position: 452371-453084 (Clockwise)
Preceding gene: 51598686
Following gene: 51598691
Centisome position: 50.03
GC content: 21.01
Gene sequence:
>714_bases ATGTCTGACAATCTAGAAACTTTAATGTTTCTAATGGGAAAAAAATTAGAAACATCTTCAAGCGATTCGAGAAATATCGA AAAAAAAGAAATTATTTCAATTGAAAGAAAAAACTTTGACTACAACAATCTAGATAAAAGTATTTCTGATTTTTTAAAAA CAAAACAATATGAAATTTTCAATATTTTTAATAATACTTATACAAAAATTGGAAAGATACTTAAAGAAACTCAAGATAAA TTAAAAGGCAATAATCAATATAACGGACTTTTTTATCGGTGGTTCAAAAGCATGGGATTTAAAAAAGATAAGGTTTACGC TTTAATATCAAGATATAATTTGCTTATCGAAAATTCCGACAAGCAGCTCACTATAGAAAAATTGCCATTATCTTTATCAT ATGAAATATCTAAAAAATCTTGCCCCTCTATTTTAAAAGATGAAGTTCTAAATGGCAAAATAAATTCTTTAAAAGAATTT AAAATTGTTTATAAAAAAAGTTTTGATTTAAAGAATACACACAAATCATTGCTTAATAAAGATAAAAAATATGAAAACGA TATAAAAGAAGAGTTGGATTTCATATTAAAAAATATAATAGAATTTAAAAATATTGAATTTAATAAATTAAGCCAAGAAA ACTTAAAATTATTTTTTCATTCTATTTTAGAAATAAAGAAAAAAATAAAATATATCAAGAATAATTTTATATAA
Upstream 100 bases:
>100_bases AAGCAAAAATGCCTGTATATGAATATGACAAAGAAAGCAATGCTGCAAAAGATTTCTTAGAGCTCTCAAAAGAGATAATA GACAAAATTGAGGAATAACT
Downstream 100 bases:
>100_bases ATTTACAACCTCACTAATAAGTATAAATAAAATATATATTCTTATTGTTCATTTTGCAAATATTAGATTGTTTTTTTACT TTTAAATTTAACTATAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSDNLETLMFLMGKKLETSSSDSRNIEKKEIISIERKNFDYNNLDKSISDFLKTKQYEIFNIFNNTYTKIGKILKETQDK LKGNNQYNGLFYRWFKSMGFKKDKVYALISRYNLLIENSDKQLTIEKLPLSLSYEISKKSCPSILKDEVLNGKINSLKEF KIVYKKSFDLKNTHKSLLNKDKKYENDIKEELDFILKNIIEFKNIEFNKLSQENLKLFFHSILEIKKKIKYIKNNFI
Sequences:
>Translated_237_residues MSDNLETLMFLMGKKLETSSSDSRNIEKKEIISIERKNFDYNNLDKSISDFLKTKQYEIFNIFNNTYTKIGKILKETQDK LKGNNQYNGLFYRWFKSMGFKKDKVYALISRYNLLIENSDKQLTIEKLPLSLSYEISKKSCPSILKDEVLNGKINSLKEF KIVYKKSFDLKNTHKSLLNKDKKYENDIKEELDFILKNIIEFKNIEFNKLSQENLKLFFHSILEIKKKIKYIKNNFI >Mature_236_residues SDNLETLMFLMGKKLETSSSDSRNIEKKEIISIERKNFDYNNLDKSISDFLKTKQYEIFNIFNNTYTKIGKILKETQDKL KGNNQYNGLFYRWFKSMGFKKDKVYALISRYNLLIENSDKQLTIEKLPLSLSYEISKKSCPSILKDEVLNGKINSLKEFK IVYKKSFDLKNTHKSLLNKDKKYENDIKEELDFILKNIIEFKNIEFNKLSQENLKLFFHSILEIKKKIKYIKNNFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28246; Mature: 28115
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNLETLMFLMGKKLETSSSDSRNIEKKEIISIERKNFDYNNLDKSISDFLKTKQYEIF CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH NIFNNTYTKIGKILKETQDKLKGNNQYNGLFYRWFKSMGFKKDKVYALISRYNLLIENSD HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCC KQLTIEKLPLSLSYEISKKSCPSILKDEVLNGKINSLKEFKIVYKKSFDLKNTHKSLLNK CEEEHHHCCCEEEECCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH DKKYENDIKEELDFILKNIIEFKNIEFNKLSQENLKLFFHSILEIKKKIKYIKNNFI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDNLETLMFLMGKKLETSSSDSRNIEKKEIISIERKNFDYNNLDKSISDFLKTKQYEIF CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH NIFNNTYTKIGKILKETQDKLKGNNQYNGLFYRWFKSMGFKKDKVYALISRYNLLIENSD HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCC KQLTIEKLPLSLSYEISKKSCPSILKDEVLNGKINSLKEFKIVYKKSFDLKNTHKSLLNK CEEEHHHCCCEEEECCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH DKKYENDIKEELDFILKNIIEFKNIEFNKLSQENLKLFFHSILEIKKKIKYIKNNFI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA