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The map label for this gene is traB

Identifier: 51598673

GI number: 51598673

Start: 427358

End: 428572

Strand: Direct

Name: traB

Synonym: BG0419

Alternate gene names: NA

Gene position: 427358-428572 (Clockwise)

Preceding gene: 51598672

Following gene: 51598674

Centisome position: 47.26

GC content: 30.04

Gene sequence:

>1215_bases
TTGGACAACAAAAAAGGAAACACCAATAAAGAAGACTATTTTTCCCATGTAAGTAAATTTAATATACACGATAAAACAAT
ATACATACTTGGAACTGCTCACGTATCAAAAAAAAGCTCAGAAGATACTGCAAATTTAATAGAAATCTTAAAGCCAGACT
ATATTGCCGTTGAACTTGATGAAGCTCGCTATCATTCGATATTAAACACCGATGAAAATGAAAAATGGAGGAACTTAGAT
ATAGATAAAGCATTAAAACAGGGAAAAGCTTTCTTTCTCATAATAAACATCATTCTTAGCAACTTTCAAAAAAAATTAGC
AAAAGAACAGGGAATACAACCTGGCGAAGAAATGAAAACAGCTATTTTAAAAGCTAAAAAGCACAATATTCCACTAATTC
TTGCTGACAGAAAAATTGAAACAACTCTAAAAAGAGCTTGGATATCTATTCCGATATTTGAAAAAATAAAAATAATCTCA
AGCCTTTTTTCCCTAACAGATACAAAACTTACAAAAGATGAAATCGAAAAACTCAAAGAACAGGACGCTCTTTCAAAAGT
AATGGAAGAACTTTCTAAAGAAATACCCAAAGTAAAAAAAGTTTTGATTGACGAAAGAGACGAATTTATTACAAATAAAA
TACTTGAAGGAACAGGCATCGTTCTTGCCGTTGTAGGCGCAGGTCATGTAAACGGAATCATGAGCACTCTAAAAGAAATA
AGCCAAAATAAAAAAATAATAAACGTTGAAGAACTCGACAAAATACCTAAAAAACATTTTTCATTTGGCAAAGTGCTATC
TTACTTAATCGCAATTTCAATCATTCTACTAATAGTAAGCTCTTTTTATTTTAAAGGATTTGATTTTGCTTACAAAAATT
TAAAGCTTTGGATAATATCTAATTCTCTTTTTTCAGGCATTGCAGCCATCTTATTAAAATCTCACCCTTTACCATTTTTA
ACAGCTGTTATAGGCTCTCCAATATTTTCCTTAATACCATTCATAGGAACAGGCATGGTAGCAGGACTTGTTGAAGCTTA
CATAAACAAACCAAAGGTCAAAGATTTTGAAAATCTACAAGAAGAATTATCAACAACAAAAGGATATTTCAAAAACAAAG
TTACAAGAATTCTATTAATAGTGCTTTTTGTAAACCTTGGATCTACAATTGGAACAATTGTAGGGCTTAAATTTTTATTA
AATGTTTTCAAATAA

Upstream 100 bases:

>100_bases
AAGAAAACAATATAGACTATATAGTTCCACTAAACCATATGGTAAAATTATTAAAAGCTATACTAATTGATAGCTAAATT
TTTTAAATAAGGAATATTTT

Downstream 100 bases:

>100_bases
ACCCTTAAAACAATAAATATCTACACAGGAGTATATATATGGGACTTGTATTTTTAGGTCCTCCAGGTTCTGGAAAGGGG
ACTATTTCAAAAATTATTTC

Product: pheromone shutdown protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDNKKGNTNKEDYFSHVSKFNIHDKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD
IDKALKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKIKIIS
SLFSLTDTKLTKDEIEKLKEQDALSKVMEELSKEIPKVKKVLIDERDEFITNKILEGTGIVLAVVGAGHVNGIMSTLKEI
SQNKKIINVEELDKIPKKHFSFGKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIISNSLFSGIAAILLKSHPLPFL
TAVIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQEELSTTKGYFKNKVTRILLIVLFVNLGSTIGTIVGLKFLL
NVFK

Sequences:

>Translated_404_residues
MDNKKGNTNKEDYFSHVSKFNIHDKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD
IDKALKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKIKIIS
SLFSLTDTKLTKDEIEKLKEQDALSKVMEELSKEIPKVKKVLIDERDEFITNKILEGTGIVLAVVGAGHVNGIMSTLKEI
SQNKKIINVEELDKIPKKHFSFGKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIISNSLFSGIAAILLKSHPLPFL
TAVIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQEELSTTKGYFKNKVTRILLIVLFVNLGSTIGTIVGLKFLL
NVFK
>Mature_404_residues
MDNKKGNTNKEDYFSHVSKFNIHDKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTDENEKWRNLD
IDKALKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKIKIIS
SLFSLTDTKLTKDEIEKLKEQDALSKVMEELSKEIPKVKKVLIDERDEFITNKILEGTGIVLAVVGAGHVNGIMSTLKEI
SQNKKIINVEELDKIPKKHFSFGKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIISNSLFSGIAAILLKSHPLPFL
TAVIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQEELSTTKGYFKNKVTRILLIVLFVNLGSTIGTIVGLKFLL
NVFK

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33342278, Length=194, Percent_Identity=29.3814432989691, Blast_Score=96, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71988206, Length=243, Percent_Identity=31.2757201646091, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71988217, Length=243, Percent_Identity=31.2757201646091, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646455, Length=230, Percent_Identity=31.304347826087, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21357445, Length=230, Percent_Identity=31.304347826087, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 45584; Mature: 45584

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKKGNTNKEDYFSHVSKFNIHDKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELD
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCHHHHHHHHHCCCEEEEEEC
EARYHSILNTDENEKWRNLDIDKALKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKT
HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AILKAKKHNIPLILADRKIETTLKRAWISIPIFEKIKIISSLFSLTDTKLTKDEIEKLKE
HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QDALSKVMEELSKEIPKVKKVLIDERDEFITNKILEGTGIVLAVVGAGHVNGIMSTLKEI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
SQNKKIINVEELDKIPKKHFSFGKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIIS
HHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEC
NSLFSGIAAILLKSHPLPFLTAVIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQ
CHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EELSTTKGYFKNKVTRILLIVLFVNLGSTIGTIVGLKFLLNVFK
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDNKKGNTNKEDYFSHVSKFNIHDKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELD
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCHHHHHHHHHCCCEEEEEEC
EARYHSILNTDENEKWRNLDIDKALKQGKAFFLIINIILSNFQKKLAKEQGIQPGEEMKT
HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AILKAKKHNIPLILADRKIETTLKRAWISIPIFEKIKIISSLFSLTDTKLTKDEIEKLKE
HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QDALSKVMEELSKEIPKVKKVLIDERDEFITNKILEGTGIVLAVVGAGHVNGIMSTLKEI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
SQNKKIINVEELDKIPKKHFSFGKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIIS
HHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEC
NSLFSGIAAILLKSHPLPFLTAVIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQ
CHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EELSTTKGYFKNKVTRILLIVLFVNLGSTIGTIVGLKFLLNVFK
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]