| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is metK [H]
Identifier: 51598632
GI number: 51598632
Start: 384919
End: 386097
Strand: Direct
Name: metK [H]
Synonym: BG0375
Alternate gene names: 51598632
Gene position: 384919-386097 (Clockwise)
Preceding gene: 51598631
Following gene: 51598633
Centisome position: 42.57
GC content: 32.23
Gene sequence:
>1179_bases ATGAATAAAATACTAGCAGCTAACCAAACTTTAACTTCTGAGGCTGTATCTGAAGGACATCCAGATAAAATTGCAGATCA AATCTCTGATGCAATCCTTGATGAAATACTAAAAGTAGATAAAAATGCAAAAGTAGCTTGCGAAGTCATAATTACACAAA ATTTAGTAGTAATAGCAGGAGAAATAAATAGTCCTGTTAAAAAAACCTTAGATATAAAAGAAATTGCTAAAAAAATCATT AAAGATATAGGCTATACAAATATTGATTATGGGCTTGATTACAAAACAATAACGGTAATAGACGCCATTGGCAATCAGTC GCAGGACATTATAAACGCAATTAAAAAAAAAGGATCTAATGCTCTTGGAGCAGGTGATCAGGGAATAATATTTGGATATG CTTGCGATGAAACAAAAAATTTTTTACCTGCTCCTTATGAACTTGCCAATTCAATTTTAAAAAAAGCTAGCAATCTTAGA AAATCAGGAGCAATAGAATGGTTGAGACCCGACTCAAAATCTCAAGTTACTATAGAATACGATAAAAACAGAAGGCCTGT AAAAATCAAAAATATTATAGTCTCTCACCAACATCATCCAAATATCTCCCAAAAACTAATAAGAGAACCAATAATTGAAG AAATTATTAAGCCCACCATTCAAGACAAGTCAATAATTGATGAAAATACTACTTATTGTATTAATCCTTCTGGAAATTTT GTAATTGGAGGACCTACCGGAGACACAGGTCTTACAGGAAGAAAAATTATTGCCGATAGCTATGGAGGATTTGCAAGGCA TGGAGGAGGAGCATATAGCGGCAAAGATGCCACAAAAGTAGACAGATCAGCCGCCTACATGGCAAGATATATAGCAAAAA ATATGGTGGCAGCCGGCATTTCTAAAGAATTCGAACTACAACTTGCATATGCAATTGGAATTGAAAATCCAATATCTATT CAAATAACTTCAGGAATCAATGATCCCAAATATGCAAATAAAATATTAAATTTCATTGTCAATAACTTCGATTTAACTCC CAACGGTATAATTGAAAAATTAAAACTAAAACAACCCATATATCTTAAAACTTGTACGTATGGTCAGTTGGGAAAGAATG AATTTGAATGGGAAAAATTAGATTTTGTAAAAAAAATACAAACGGTGCTAAAAAAATGA
Upstream 100 bases:
>100_bases ATTTACCAAACAATAAAGACAACCATATAGACTTTAATAAATTTTTAAAAACATCATCAATAAATTCAAGCAAAATGACA AAGGAACTTATTAGGCTAAT
Downstream 100 bases:
>100_bases AAAAAATAACAAGCTTTACAATAGATCATACAAAATTAAACCCCGGCATATATGTCTCAAGAAAAGACACCTTTGAAAAT GTAATATTTACTACAATAGA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MNKILAANQTLTSEAVSEGHPDKIADQISDAILDEILKVDKNAKVACEVIITQNLVVIAGEINSPVKKTLDIKEIAKKII KDIGYTNIDYGLDYKTITVIDAIGNQSQDIINAIKKKGSNALGAGDQGIIFGYACDETKNFLPAPYELANSILKKASNLR KSGAIEWLRPDSKSQVTIEYDKNRRPVKIKNIIVSHQHHPNISQKLIREPIIEEIIKPTIQDKSIIDENTTYCINPSGNF VIGGPTGDTGLTGRKIIADSYGGFARHGGGAYSGKDATKVDRSAAYMARYIAKNMVAAGISKEFELQLAYAIGIENPISI QITSGINDPKYANKILNFIVNNFDLTPNGIIEKLKLKQPIYLKTCTYGQLGKNEFEWEKLDFVKKIQTVLKK
Sequences:
>Translated_392_residues MNKILAANQTLTSEAVSEGHPDKIADQISDAILDEILKVDKNAKVACEVIITQNLVVIAGEINSPVKKTLDIKEIAKKII KDIGYTNIDYGLDYKTITVIDAIGNQSQDIINAIKKKGSNALGAGDQGIIFGYACDETKNFLPAPYELANSILKKASNLR KSGAIEWLRPDSKSQVTIEYDKNRRPVKIKNIIVSHQHHPNISQKLIREPIIEEIIKPTIQDKSIIDENTTYCINPSGNF VIGGPTGDTGLTGRKIIADSYGGFARHGGGAYSGKDATKVDRSAAYMARYIAKNMVAAGISKEFELQLAYAIGIENPISI QITSGINDPKYANKILNFIVNNFDLTPNGIIEKLKLKQPIYLKTCTYGQLGKNEFEWEKLDFVKKIQTVLKK >Mature_392_residues MNKILAANQTLTSEAVSEGHPDKIADQISDAILDEILKVDKNAKVACEVIITQNLVVIAGEINSPVKKTLDIKEIAKKII KDIGYTNIDYGLDYKTITVIDAIGNQSQDIINAIKKKGSNALGAGDQGIIFGYACDETKNFLPAPYELANSILKKASNLR KSGAIEWLRPDSKSQVTIEYDKNRRPVKIKNIIVSHQHHPNISQKLIREPIIEEIIKPTIQDKSIIDENTTYCINPSGNF VIGGPTGDTGLTGRKIIADSYGGFARHGGGAYSGKDATKVDRSAAYMARYIAKNMVAAGISKEFELQLAYAIGIENPISI QITSGINDPKYANKILNFIVNNFDLTPNGIIEKLKLKQPIYLKTCTYGQLGKNEFEWEKLDFVKKIQTVLKK
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=372, Percent_Identity=47.3118279569892, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI5174529, Length=372, Percent_Identity=45.9677419354839, Blast_Score=335, Evalue=5e-92, Organism=Escherichia coli, GI1789311, Length=376, Percent_Identity=49.2021276595745, Blast_Score=377, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17551082, Length=392, Percent_Identity=45.9183673469388, Blast_Score=344, Evalue=4e-95, Organism=Caenorhabditis elegans, GI17538494, Length=390, Percent_Identity=46.6666666666667, Blast_Score=338, Evalue=3e-93, Organism=Caenorhabditis elegans, GI17538498, Length=373, Percent_Identity=47.4530831099196, Blast_Score=337, Evalue=7e-93, Organism=Caenorhabditis elegans, GI25145633, Length=377, Percent_Identity=46.9496021220159, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI32565905, Length=390, Percent_Identity=43.3333333333333, Blast_Score=294, Evalue=6e-80, Organism=Caenorhabditis elegans, GI32565911, Length=329, Percent_Identity=45.5927051671732, Blast_Score=281, Evalue=3e-76, Organism=Caenorhabditis elegans, GI25145635, Length=333, Percent_Identity=45.045045045045, Blast_Score=274, Evalue=7e-74, Organism=Caenorhabditis elegans, GI32565903, Length=332, Percent_Identity=44.2771084337349, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI32565909, Length=82, Percent_Identity=47.5609756097561, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323209, Length=379, Percent_Identity=47.4934036939314, Blast_Score=333, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6320710, Length=373, Percent_Identity=48.2573726541555, Blast_Score=333, Evalue=3e-92, Organism=Drosophila melanogaster, GI24580527, Length=378, Percent_Identity=47.6190476190476, Blast_Score=322, Evalue=3e-88, Organism=Drosophila melanogaster, GI24580525, Length=378, Percent_Identity=47.6190476190476, Blast_Score=322, Evalue=3e-88, Organism=Drosophila melanogaster, GI45552159, Length=378, Percent_Identity=47.3544973544974, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI24580529, Length=378, Percent_Identity=47.3544973544974, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI24580537, Length=378, Percent_Identity=47.3544973544974, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI24580533, Length=378, Percent_Identity=47.3544973544974, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI24580535, Length=378, Percent_Identity=47.3544973544974, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI24580531, Length=378, Percent_Identity=47.3544973544974, Blast_Score=321, Evalue=6e-88, Organism=Drosophila melanogaster, GI24580541, Length=375, Percent_Identity=46.4, Blast_Score=305, Evalue=5e-83, Organism=Drosophila melanogaster, GI24580539, Length=151, Percent_Identity=41.0596026490066, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 43166; Mature: 43166
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00376 ADOMET_SYNTHETASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILAANQTLTSEAVSEGHPDKIADQISDAILDEILKVDKNAKVACEVIITQNLVVIAG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEE EINSPVKKTLDIKEIAKKIIKDIGYTNIDYGLDYKTITVIDAIGNQSQDIINAIKKKGSN CCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCC ALGAGDQGIIFGYACDETKNFLPAPYELANSILKKASNLRKSGAIEWLRPDSKSQVTIEY CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEE DKNRRPVKIKNIIVSHQHHPNISQKLIREPIIEEIIKPTIQDKSIIDENTTYCINPSGNF CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCCE VIGGPTGDTGLTGRKIIADSYGGFARHGGGAYSGKDATKVDRSAAYMARYIAKNMVAAGI EEECCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC SKEFELQLAYAIGIENPISIQITSGINDPKYANKILNFIVNNFDLTPNGIIEKLKLKQPI CCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE YLKTCTYGQLGKNEFEWEKLDFVKKIQTVLKK EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKILAANQTLTSEAVSEGHPDKIADQISDAILDEILKVDKNAKVACEVIITQNLVVIAG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEE EINSPVKKTLDIKEIAKKIIKDIGYTNIDYGLDYKTITVIDAIGNQSQDIINAIKKKGSN CCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCC ALGAGDQGIIFGYACDETKNFLPAPYELANSILKKASNLRKSGAIEWLRPDSKSQVTIEY CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEE DKNRRPVKIKNIIVSHQHHPNISQKLIREPIIEEIIKPTIQDKSIIDENTTYCINPSGNF CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCCE VIGGPTGDTGLTGRKIIADSYGGFARHGGGAYSGKDATKVDRSAAYMARYIAKNMVAAGI EEECCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC SKEFELQLAYAIGIENPISIQITSGINDPKYANKILNFIVNNFDLTPNGIIEKLKLKQPI CCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE YLKTCTYGQLGKNEFEWEKLDFVKKIQTVLKK EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA