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The map label for this gene is oppA-3 [H]

Identifier: 51598588

GI number: 51598588

Start: 337116

End: 338741

Strand: Direct

Name: oppA-3 [H]

Synonym: BG0331

Alternate gene names: 51598588

Gene position: 337116-338741 (Clockwise)

Preceding gene: 51598587

Following gene: 51598589

Centisome position: 37.28

GC content: 30.07

Gene sequence:

>1626_bases
ATGAATTTTAATAAAGCTAAGAAAATTGGTAGAAAAATCAAAATAGCAGCACTAATTATGCTTGCCATATCTTTAATTAC
ATGTAATAACAATTCAGAAAAGGAAAAATTAACATTTAAAGTATACATAGGGGGAGCACCTTCATCACTTGACCCACACT
TAGTAGATGAGACAATCGGAGCAAGAATTTTAGAACAAGTATTCTCGGGACTCTTAGCATTAAATACCAAAACAGGAAAG
CTAATGCCTGGACTTGCTAAAAATTGGGAAGCCTCAAAAGATAAAAAAACATATCAATTTTACCTAAGAGACAACCTTTT
TTGGAGCGATGGAGTTTCAATTACCGCTGAAGGGATAAAAAAATCTTTTTTAAGAATTTTAAATAAAGAAACAGAATCTA
CACATGTTGATATGCTTAAATCAATAATAAAAAATGGACAGGAATATTTTGATGGAAAAGTATCTGATTCTGAACTTGGA
TTTAAGGCAATTGATAGCAAAACATTGGAAATAACACTTACATCTCCAAAAACCTATTTTCTTGAATTGCTCCTACATCA
CACATTCATGCCAGTGCCTATTCATGTTATTGAAAAATATAAGGAGAATTGGACAAACCCTGAAAACATGGTTACCAGCG
GTCCTTTTAAATTAAAAAAAAGATTGCCTAATGAAAAAATTATATTTGAAAAAAACGAACATTATTACAATGCAAAAGAA
GTAGAACTTGAAGAGCTTGTCTACATTACGTCTGACAATGATATGACTGTATATAATATGTACAAAAACAATGAAATCGA
TGCTATTTTTAACAGCATACCGCCGGATATTGTAAATGAAATAAAACTACAAAATGACTATTATCAACACAAAAGCAATG
CAATTTATTTATACTCGTTTAATACAAAAATAAAACCCCTTGATGATGCTAAGGTTAGAGAAGCTTTAACGTTAGCTATT
GACAGAGAAACTTTAACTTACAAAGTACTTAATGACGGCACAGTTCCCACAAGAGAAATAACGCCTGATCTTGAAAATTA
CAATTATGGCAAAAAATTGGCTTTATTTGATCCTGAAAAATCTAAAAAGCTTTTAACAGAAGCTGGATATCCTAATGGAA
AAGGATTCCCAACCCTAACGCTAAAATATAATACAAACGAAACTCATAAAAAAGTTGCTACATTTATTCAAAACCAATGG
AAAAAAATTTTAAATATAAATATTATGCTTACTAATGAAAATTGGCCTGTTCTTACCAATAGTAGAAATACGGGTAATTT
TGAAATAATAAGAATTGGGCGCATTGGAGAATATTTGGATCCACACACATACTTCACTATATTCACAAGCAAAAATTCTC
AACTTGCATCATACAAATATGCAAACTTAGAATTTGACAAGCTTATCAAAGAATCAGATTTTGAGCAAGATCCTATAAAA
AGAAAAAATTTACTCAGAAAGGCAGAATCAATAATAATTGAAAAAGATTTTCCTGCCGCACCAATATACATATATTCTGG
ACACTATCTTTTCAGAAACGATAAGTGGACTGGATGGAGTCCTAATGTATCAGAAATTTATTATTTTTTTGAATTAAAAT
CAATTAAAAATGCAAAACGAAATTAA

Upstream 100 bases:

>100_bases
TTTTCATAGGCGATTTTTTTATTGACTTTCTTCTAAAAAGAAGATAGCTTAAAACTTATAAAAAAAATAAAATAATTTTA
AATTTTGGGGAAAGGTTAAA

Downstream 100 bases:

>100_bases
TTAATTTTTTAAAAGGGCTTAATATAAATTAAAAATAATATTTGAGTCTAATATAAAGGCAAAAATATACAAATAATGTT
TAAGATTCTAAGTTGAAATT

Product: oligopeptide ABC transporter, periplasmic oligopeptide-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MNFNKAKKIGRKIKIAALIMLAISLITCNNNSEKEKLTFKVYIGGAPSSLDPHLVDETIGARILEQVFSGLLALNTKTGK
LMPGLAKNWEASKDKKTYQFYLRDNLFWSDGVSITAEGIKKSFLRILNKETESTHVDMLKSIIKNGQEYFDGKVSDSELG
FKAIDSKTLEITLTSPKTYFLELLLHHTFMPVPIHVIEKYKENWTNPENMVTSGPFKLKKRLPNEKIIFEKNEHYYNAKE
VELEELVYITSDNDMTVYNMYKNNEIDAIFNSIPPDIVNEIKLQNDYYQHKSNAIYLYSFNTKIKPLDDAKVREALTLAI
DRETLTYKVLNDGTVPTREITPDLENYNYGKKLALFDPEKSKKLLTEAGYPNGKGFPTLTLKYNTNETHKKVATFIQNQW
KKILNINIMLTNENWPVLTNSRNTGNFEIIRIGRIGEYLDPHTYFTIFTSKNSQLASYKYANLEFDKLIKESDFEQDPIK
RKNLLRKAESIIIEKDFPAAPIYIYSGHYLFRNDKWTGWSPNVSEIYYFFELKSIKNAKRN

Sequences:

>Translated_541_residues
MNFNKAKKIGRKIKIAALIMLAISLITCNNNSEKEKLTFKVYIGGAPSSLDPHLVDETIGARILEQVFSGLLALNTKTGK
LMPGLAKNWEASKDKKTYQFYLRDNLFWSDGVSITAEGIKKSFLRILNKETESTHVDMLKSIIKNGQEYFDGKVSDSELG
FKAIDSKTLEITLTSPKTYFLELLLHHTFMPVPIHVIEKYKENWTNPENMVTSGPFKLKKRLPNEKIIFEKNEHYYNAKE
VELEELVYITSDNDMTVYNMYKNNEIDAIFNSIPPDIVNEIKLQNDYYQHKSNAIYLYSFNTKIKPLDDAKVREALTLAI
DRETLTYKVLNDGTVPTREITPDLENYNYGKKLALFDPEKSKKLLTEAGYPNGKGFPTLTLKYNTNETHKKVATFIQNQW
KKILNINIMLTNENWPVLTNSRNTGNFEIIRIGRIGEYLDPHTYFTIFTSKNSQLASYKYANLEFDKLIKESDFEQDPIK
RKNLLRKAESIIIEKDFPAAPIYIYSGHYLFRNDKWTGWSPNVSEIYYFFELKSIKNAKRN
>Mature_541_residues
MNFNKAKKIGRKIKIAALIMLAISLITCNNNSEKEKLTFKVYIGGAPSSLDPHLVDETIGARILEQVFSGLLALNTKTGK
LMPGLAKNWEASKDKKTYQFYLRDNLFWSDGVSITAEGIKKSFLRILNKETESTHVDMLKSIIKNGQEYFDGKVSDSELG
FKAIDSKTLEITLTSPKTYFLELLLHHTFMPVPIHVIEKYKENWTNPENMVTSGPFKLKKRLPNEKIIFEKNEHYYNAKE
VELEELVYITSDNDMTVYNMYKNNEIDAIFNSIPPDIVNEIKLQNDYYQHKSNAIYLYSFNTKIKPLDDAKVREALTLAI
DRETLTYKVLNDGTVPTREITPDLENYNYGKKLALFDPEKSKKLLTEAGYPNGKGFPTLTLKYNTNETHKKVATFIQNQW
KKILNINIMLTNENWPVLTNSRNTGNFEIIRIGRIGEYLDPHTYFTIFTSKNSQLASYKYANLEFDKLIKESDFEQDPIK
RKNLLRKAESIIIEKDFPAAPIYIYSGHYLFRNDKWTGWSPNVSEIYYFFELKSIKNAKRN

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=525, Percent_Identity=32.3809523809524, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI87081878, Length=521, Percent_Identity=32.6295585412668, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1789397, Length=473, Percent_Identity=31.9238900634249, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI1789966, Length=523, Percent_Identity=26.1950286806883, Blast_Score=143, Evalue=3e-35,
Organism=Escherichia coli, GI1787052, Length=514, Percent_Identity=24.5136186770428, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789887, Length=390, Percent_Identity=25.3846153846154, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1787762, Length=486, Percent_Identity=24.2798353909465, Blast_Score=92, Evalue=9e-20,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62633; Mature: 62633

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNKAKKIGRKIKIAALIMLAISLITCNNNSEKEKLTFKVYIGGAPSSLDPHLVDETIG
CCCHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH
ARILEQVFSGLLALNTKTGKLMPGLAKNWEASKDKKTYQFYLRDNLFWSDGVSITAEGIK
HHHHHHHHHHHEEECCCCCCCCCCHHCCCCCCCCCCEEEEEEECCEEECCCCEEEHHHHH
KSFLRILNKETESTHVDMLKSIIKNGQEYFDGKVSDSELGFKAIDSKTLEITLTSPKTYF
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCCEEEEEEECCHHHH
LELLLHHTFMPVPIHVIEKYKENWTNPENMVTSGPFKLKKRLPNEKIIFEKNEHYYNAKE
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHCEECCCHHHHHHCCCCEEEEECCCCCCCCCE
VELEELVYITSDNDMTVYNMYKNNEIDAIFNSIPPDIVNEIKLQNDYYQHKSNAIYLYSF
EEEEHEEEEECCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHCCHHHHCCCCEEEEEEE
NTKIKPLDDAKVREALTLAIDRETLTYKVLNDGTVPTREITPDLENYNYGKKLALFDPEK
CCCCCCCCCHHHHHHEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH
SKKLLTEAGYPNGKGFPTLTLKYNTNETHKKVATFIQNQWKKILNINIMLTNENWPVLTN
HHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEC
SRNTGNFEIIRIGRIGEYLDPHTYFTIFTSKNSQLASYKYANLEFDKLIKESDFEQDPIK
CCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCHH
RKNLLRKAESIIIEKDFPAAPIYIYSGHYLFRNDKWTGWSPNVSEIYYFFELKSIKNAKR
HHHHHHHHHHEEEECCCCCCCEEEEECEEEEECCCCCCCCCCHHHEEEEEEEHHHHCCCC
N
C
>Mature Secondary Structure
MNFNKAKKIGRKIKIAALIMLAISLITCNNNSEKEKLTFKVYIGGAPSSLDPHLVDETIG
CCCHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH
ARILEQVFSGLLALNTKTGKLMPGLAKNWEASKDKKTYQFYLRDNLFWSDGVSITAEGIK
HHHHHHHHHHHEEECCCCCCCCCCHHCCCCCCCCCCEEEEEEECCEEECCCCEEEHHHHH
KSFLRILNKETESTHVDMLKSIIKNGQEYFDGKVSDSELGFKAIDSKTLEITLTSPKTYF
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCCEEEEEEECCHHHH
LELLLHHTFMPVPIHVIEKYKENWTNPENMVTSGPFKLKKRLPNEKIIFEKNEHYYNAKE
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHCEECCCHHHHHHCCCCEEEEECCCCCCCCCE
VELEELVYITSDNDMTVYNMYKNNEIDAIFNSIPPDIVNEIKLQNDYYQHKSNAIYLYSF
EEEEHEEEEECCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHCCHHHHCCCCEEEEEEE
NTKIKPLDDAKVREALTLAIDRETLTYKVLNDGTVPTREITPDLENYNYGKKLALFDPEK
CCCCCCCCCHHHHHHEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH
SKKLLTEAGYPNGKGFPTLTLKYNTNETHKKVATFIQNQWKKILNINIMLTNENWPVLTN
HHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEC
SRNTGNFEIIRIGRIGEYLDPHTYFTIFTSKNSQLASYKYANLEFDKLIKESDFEQDPIK
CCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCHH
RKNLLRKAESIIIEKDFPAAPIYIYSGHYLFRNDKWTGWSPNVSEIYYFFELKSIKNAKR
HHHHHHHHHHEEEECCCCCCCEEEEECEEEEECCCCCCCCCCHHHEEEEEEEHHHHCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821267; 3525163; 11677609; 8202710; 8747465; 10422831; 10438628 [H]