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The map label for this gene is yebA [H]

Identifier: 51598515

GI number: 51598515

Start: 264903

End: 265847

Strand: Direct

Name: yebA [H]

Synonym: BG0258

Alternate gene names: 51598515

Gene position: 264903-265847 (Clockwise)

Preceding gene: 51598514

Following gene: 51598516

Centisome position: 29.3

GC content: 28.25

Gene sequence:

>945_bases
ATGTATAGAATACAAAAAACCTTACTTATATTTTGTATTCTAGGAATAGAAAATATAAATTCAGAAATAATAAATACTAT
TCCTAAAGTCCAATATAAAAAAGAAGCATTTCAAGGAGATTACATATACTTTGCAAGTAATGAAAACTTTAAAAAGTTGT
CGCTTTTAAGCATAAATAAAAATCCAATCATAAGTTCTTCTCCATTCAAATTTACAGTAGGAAGTAAAACTTACTACATA
GCATTTATAGGAATTACACCAATGATAAAAGAGGGGAAAAGAAAAATTCAAATAGAATTCAAAAATAAAAGCTATGTCAA
AGAAGTAGAAATAAAAAAATTTAACTTCAAAAAAACAACAATTAGTTTTAATAAAGAAAAAGCCAAGCTTATTACCCAAA
AAAAATCCATAAAACAAAAAGAACAAGCTTTGGTTTTATGGAATATTATTGGCAATATTGGAGATACAACAATATATCAC
TACGATGCTTTAGTTAAACCCATAAAAGATCAATACATTATAACAAGTCAATATGGAGATTTAAGGCTTTACATGCAAGG
CAGCAAAAAAATTTCAAATTATACGATGCATAATGGAATTGATTATGCCCCATTTAAAAGAGAAAATACTCCAATTTTTG
CTGCAGGCAAAGGAAAAGTTGTATTTGCACAAAATAGAGAACTAACAGGGAACACCCTTATAATACAGCATTTGCCAGGT
GTGTTTACAATTTACCTTCACCTCTCAAAATTAGGAATAAGTGAAAATAAAGTAGTTAGTGCCGGCGAATATGTTGGACA
TACTGGAAATACAGGCCTCTCAACAGGCCCTCATTTACACTTCGAAGTAAGAATTAATGGCATAGCAATAAACCCAGATT
TCCTTTTAAATGGCATGCTTATTGACAAAAATAAAATAATAAATAATATTAAAAGAATAGAGTAA

Upstream 100 bases:

>100_bases
AATCAATATTTAGACATCATTTTTACAATTAATGAAGATTTTTACTGCCCGAGAGAAAAAATTTTGAAAATCATAGACAT
AAAAAAGAGCGCTCAAATCA

Downstream 100 bases:

>100_bases
AAGGAGGTGATTTTTTGGTAACAGTCACTGTGGACAAAAATGAAAATCTTGAAAAAGCATTGAAACGTTTTAAAAGAATG
ATTGAAAAAGAAGCAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MYRIQKTLLIFCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNENFKKLSLLSINKNPIISSSPFKFTVGSKTYYI
AFIGITPMIKEGKRKIQIEFKNKSYVKEVEIKKFNFKKTTISFNKEKAKLITQKKSIKQKEQALVLWNIIGNIGDTTIYH
YDALVKPIKDQYIITSQYGDLRLYMQGSKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQHLPG
VFTIYLHLSKLGISENKVVSAGEYVGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE

Sequences:

>Translated_314_residues
MYRIQKTLLIFCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNENFKKLSLLSINKNPIISSSPFKFTVGSKTYYI
AFIGITPMIKEGKRKIQIEFKNKSYVKEVEIKKFNFKKTTISFNKEKAKLITQKKSIKQKEQALVLWNIIGNIGDTTIYH
YDALVKPIKDQYIITSQYGDLRLYMQGSKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQHLPG
VFTIYLHLSKLGISENKVVSAGEYVGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE
>Mature_314_residues
MYRIQKTLLIFCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNENFKKLSLLSINKNPIISSSPFKFTVGSKTYYI
AFIGITPMIKEGKRKIQIEFKNKSYVKEVEIKKFNFKKTTISFNKEKAKLITQKKSIKQKEQALVLWNIIGNIGDTTIYH
YDALVKPIKDQYIITSQYGDLRLYMQGSKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQHLPG
VFTIYLHLSKLGISENKVVSAGEYVGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=96, Percent_Identity=40.625, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 35815; Mature: 35815

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIQKTLLIFCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNENFKKLSLLSINK
CCCHHHEEEEHEEECCCCCCHHHHHHCCCCEEHHHHCCCCEEEEECCCCCEEEEEEEECC
NPIISSSPFKFTVGSKTYYIAFIGITPMIKEGKRKIQIEFKNKSYVKEVEIKKFNFKKTT
CCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEE
ISFNKEKAKLITQKKSIKQKEQALVLWNIIGNIGDTTIYHYDALVKPIKDQYIITSQYGD
EEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEHHHHCCCCCCEEEEECCCC
LRLYMQGSKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQHLPG
EEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCC
VFTIYLHLSKLGISENKVVSAGEYVGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGML
EEEEEEEHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEECHHHEEECEE
IDKNKIINNIKRIE
EECHHHHHHHHCCC
>Mature Secondary Structure
MYRIQKTLLIFCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNENFKKLSLLSINK
CCCHHHEEEEHEEECCCCCCHHHHHHCCCCEEHHHHCCCCEEEEECCCCCEEEEEEEECC
NPIISSSPFKFTVGSKTYYIAFIGITPMIKEGKRKIQIEFKNKSYVKEVEIKKFNFKKTT
CCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEE
ISFNKEKAKLITQKKSIKQKEQALVLWNIIGNIGDTTIYHYDALVKPIKDQYIITSQYGD
EEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEHHHHCCCCCCEEEEECCCC
LRLYMQGSKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQHLPG
EEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCC
VFTIYLHLSKLGISENKVVSAGEYVGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGML
EEEEEEEHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEECHHHEEECEE
IDKNKIINNIKRIE
EECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]