Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

Click here to switch to the map view.

The map label for this gene is 51598398

Identifier: 51598398

GI number: 51598398

Start: 131119

End: 132246

Strand: Direct

Name: 51598398

Synonym: BG0136

Alternate gene names: NA

Gene position: 131119-132246 (Clockwise)

Preceding gene: 51598380

Following gene: 51598400

Centisome position: 14.5

GC content: 25.44

Gene sequence:

>1128_bases
ATGAAACCTAATAAAATTATTAATAAGGCTATTTATCACTATAATTCAAAAAAATATTCACAAGCAATAAAGCTCCTAGA
AAAAGAAATTTTTTTCTACAAAAACTACTATTTGTATCACTATGTCTTGGGAATGTCTTATCTTCGTATTGGAAACCTTG
GCAATGCTCAAACATATCTTAAAAAAGCTTACACTTTAAACCCTGGCGAATCAAATATAAAACAAGCTATTGCTATACTT
TTAGTAAGTCAAGGCAAAGAAGAAAAAGCTATTCAAATATGGCTTAAAATGATAGAAGAAAATCAAGAAGTAGATCGATC
AGAGCTGTCTCTTGAAATTATTCGAAAAAACCCTGTTGAAGGATCTGTTTTTTTAAAAAACAACAACCTATATGAAAAAT
TATTCCCAATAATTAAAGCAATACCAGATAAAAATTTAACAAAGCTAATCATAACAATTGCCATTGGAGGAATTGTATTT
ATTCCAATATTAGCAATCTATTTTATTTTTTATGAACAAAAAATAACAACATCCATAAATCGAAAAGCAGAAATAAAAAA
AAAATTAAACAATATTACTGCTTACATTGACGACATTAAAATAAATAACAAGGAAAAAATAAAAAATGAAGAAGGTCAAT
TTATATTAATATTAACCAGCGATGAAATTAAAAATTCTTTCGAAAAAATCAAAATTTATTTAAAAACAGGAAAAGATAAT
TTCGCAAGAGTAGAAATAAATAAAATATTAAATTCAAATGCATCGGAATCCATAAAACTAAAAGCCAAAAATCTTGCGAG
TTTTATCTCAAGGCCAGATTTTATTAGCTTTAATGAATATCTAAACTTACAAGATATTAAAAAAGATCCATCAATCTATG
CAAACGTATATGTAAAATGGGAAGGAGTAGTAAATAACGTCGAAAAAAAAGATAACATAATTCAGTTTGACTTTTATGTA
GGATACAATAAAAACGTACTCTCAGGAATTATTCCAACAAAAACAACCTTTGATATTGATATTGATTTTAAAGACAATGT
TGAAATACTTGGACAAATAGAATATAAAAAGAACAAACTTATCTTAAATGCAATCACAATTAGGAAAATAGATAAAAATG
CAAATTAA

Upstream 100 bases:

>100_bases
AAATTAGGGCAAAATAACAATATTCTATTTATTATTCTTTTAAAATAAAATCTTATATTATAATATTAAAAAGAAAATTG
TGGGGTCAAATTCTAGCTAT

Downstream 100 bases:

>100_bases
TCTTAATATCTTTGCCAAAATTTTTCAAGACAATCAACATTTAAGATTAAAAAGGAGTGCACAGTAGCTTTTCATTACAT
TTGATAACATTGATTACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYLKKAYTLNPGESNIKQAIAIL
LVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVEGSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVF
IPILAIYFIFYEQKITTSINRKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN
FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKWEGVVNNVEKKDNIIQFDFYV
GYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKLILNAITIRKIDKNAN

Sequences:

>Translated_375_residues
MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYLKKAYTLNPGESNIKQAIAIL
LVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVEGSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVF
IPILAIYFIFYEQKITTSINRKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN
FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKWEGVVNNVEKKDNIIQFDFYV
GYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKLILNAITIRKIDKNAN
>Mature_375_residues
MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYLKKAYTLNPGESNIKQAIAIL
LVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVEGSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVF
IPILAIYFIFYEQKITTSINRKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN
FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKWEGVVNNVEKKDNIIQFDFYV
GYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKLILNAITIRKIDKNAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43502; Mature: 43502

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH
KKAYTLNPGESNIKQAIAILLVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVE
HHHEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCC
GSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVFIPILAIYFIFYEQKITTSIN
CEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN
HHHHHHHHHHHHEEEEEEEEECCHHHCCCCCCCEEEEEECHHHHCCCEEEEEEEEECCCC
FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKW
EEEEEEHHHHCCCCCCEEEEEHHHHHHHHCCCCEECHHHCCCHHHCCCCCCEEEEEEEEE
EGVVNNVEKKDNIIQFDFYVGYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKL
ECHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCEE
ILNAITIRKIDKNAN
EEEEEEEEEECCCCC
>Mature Secondary Structure
MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH
KKAYTLNPGESNIKQAIAILLVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVE
HHHEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCC
GSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVFIPILAIYFIFYEQKITTSIN
CEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN
HHHHHHHHHHHHEEEEEEEEECCHHHCCCCCCCEEEEEECHHHHCCCEEEEEEEEECCCC
FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKW
EEEEEEHHHHCCCCCCEEEEEHHHHHHHHCCCCEECHHHCCCHHHCCCCCCEEEEEEEEE
EGVVNNVEKKDNIIQFDFYVGYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKL
ECHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCEE
ILNAITIRKIDKNAN
EEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA