| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598336
Identifier: 51598336
GI number: 51598336
Start: 71031
End: 72440
Strand: Direct
Name: 51598336
Synonym: BG0074
Alternate gene names: NA
Gene position: 71031-72440 (Clockwise)
Preceding gene: 51598335
Following gene: 51598337
Centisome position: 7.86
GC content: 23.55
Gene sequence:
>1410_bases ATGGAAAAGTTTAAACTAACCCTAGTAATGCCGTTGCTAATATTTACAATATATAAAATACATTCTCAAAGTAATATTGA ATACAACTTTTCCTATATCATTAATACAAAAAAAGAAAATATTGACCTTAAAAAAGGAATTGAAAAACAATTAAACAAAG TCTACGATAAAATAACAGAGCATGTTGTAAGCAACGATGACAAGAATATTATTGAAGATATTTATATAAATCAAGATATA ATAAAAACAGAACTTGAAATTAGCAAATTAAAAAAAGAAATGGATATAAAAAAACTGCAAAACATAATAAACGCAAAAGA AAAGCATAACACTGAAACTAAAATCGATGAGCTTAAAAAAAATATTCAAAATATTAAAAGCAAAAAAAAAAGATTTGCAG AATATTTTAGCAATTTAAAAAAATTAAAAGTAAAATATAAAAAAATCGAAGAACAAACAAACATCTCAAATTTAAATAAA GAATTTTTCATAAGAGAAGAATTATTTTTTATTAGCTATATTGACCTTAAAAAAATAGAAAATTATTATTTACTAGAAAT TAGCAACGTTACTCCCGAGAAAATTGAGACTGAAAAAGCAGTATTTAAAACATCCTCTTCTGTTAATGAAATTGCAGATA AAATAACAAAACACAGTTTCAAAAAAATATTAGGTAGAGAATTTTTAAAAATCAACATTAATGTCAAAAACAACTCGGAT GCAAAAATCTATATAAATGAAAAATTTGTTTCAAAAGGAATCTATTACAATAATATTTTTGACATTTCTAAAATCCCAAA CAAAGAAATTGAAATACAAATCACAAGCACAAATTTCGAAAACTACTCTATTAAAAGAAAAGTAAAAAATGCAGATTCAA TAATATTAAATATTGACTTAAAAAGAACAATCTCTAAAAAAGTAGAAATTAAAAGCAATGTGAAATCTAAAGTTTTTAAA AAAGGCATATTTATGGGAGAAACCCCAATTGAAATAGAAAAACCAGAAAATCAAGACATCATTTTGCTTAAATCTGAAGG ATATAAAGATAAATTCAAGTTAATAAATAAAGAAAAAGATCAAGTAGAAATAGAAATGATAAAAACTATCAAAAATAGAC TTAGCAATAAAAGAGATAAATTTTATATTAATCTAGCTGTTTTTACATTAAGCACAATAGGAACCATTTTTGCAGGAACG TTACTTAACAATGCAGAAGCACTTTATAAAATAACTGGCAATCACTTTATCAACAAAATATTAACAGCTGAAGATGTTTA TATGGCAAAAGCAGAACAAATGACTGCAAAATTTCTATTTGGAGCAGGTATTACCTTAACTATTGGTAGCTTTATTTCAT TAATAACTCATTTAGTAGAATATATTAAAGAAGCAAATCTAGGAGAATAG
Upstream 100 bases:
>100_bases CTTACAATTTAGTAAAAGATCACAGAACAAAATTTGAAAATTCAAACACCACTTCGGTTATGGACGGCAATATAGATAAT TTCATAGAAGAGTATTTAAA
Downstream 100 bases:
>100_bases ATTTAACAATTAGCAATAAAATAGGAGAACAAACATTTGGGCATTTTAGAAAAAATAAAAAATTTATTTAAAAGCAAGCA ACAAGAAAATATTATTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MEKFKLTLVMPLLIFTIYKIHSQSNIEYNFSYIINTKKENIDLKKGIEKQLNKVYDKITEHVVSNDDKNIIEDIYINQDI IKTELEISKLKKEMDIKKLQNIINAKEKHNTETKIDELKKNIQNIKSKKKRFAEYFSNLKKLKVKYKKIEEQTNISNLNK EFFIREELFFISYIDLKKIENYYLLEISNVTPEKIETEKAVFKTSSSVNEIADKITKHSFKKILGREFLKININVKNNSD AKIYINEKFVSKGIYYNNIFDISKIPNKEIEIQITSTNFENYSIKRKVKNADSIILNIDLKRTISKKVEIKSNVKSKVFK KGIFMGETPIEIEKPENQDIILLKSEGYKDKFKLINKEKDQVEIEMIKTIKNRLSNKRDKFYINLAVFTLSTIGTIFAGT LLNNAEALYKITGNHFINKILTAEDVYMAKAEQMTAKFLFGAGITLTIGSFISLITHLVEYIKEANLGE
Sequences:
>Translated_469_residues MEKFKLTLVMPLLIFTIYKIHSQSNIEYNFSYIINTKKENIDLKKGIEKQLNKVYDKITEHVVSNDDKNIIEDIYINQDI IKTELEISKLKKEMDIKKLQNIINAKEKHNTETKIDELKKNIQNIKSKKKRFAEYFSNLKKLKVKYKKIEEQTNISNLNK EFFIREELFFISYIDLKKIENYYLLEISNVTPEKIETEKAVFKTSSSVNEIADKITKHSFKKILGREFLKININVKNNSD AKIYINEKFVSKGIYYNNIFDISKIPNKEIEIQITSTNFENYSIKRKVKNADSIILNIDLKRTISKKVEIKSNVKSKVFK KGIFMGETPIEIEKPENQDIILLKSEGYKDKFKLINKEKDQVEIEMIKTIKNRLSNKRDKFYINLAVFTLSTIGTIFAGT LLNNAEALYKITGNHFINKILTAEDVYMAKAEQMTAKFLFGAGITLTIGSFISLITHLVEYIKEANLGE >Mature_469_residues MEKFKLTLVMPLLIFTIYKIHSQSNIEYNFSYIINTKKENIDLKKGIEKQLNKVYDKITEHVVSNDDKNIIEDIYINQDI IKTELEISKLKKEMDIKKLQNIINAKEKHNTETKIDELKKNIQNIKSKKKRFAEYFSNLKKLKVKYKKIEEQTNISNLNK EFFIREELFFISYIDLKKIENYYLLEISNVTPEKIETEKAVFKTSSSVNEIADKITKHSFKKILGREFLKININVKNNSD AKIYINEKFVSKGIYYNNIFDISKIPNKEIEIQITSTNFENYSIKRKVKNADSIILNIDLKRTISKKVEIKSNVKSKVFK KGIFMGETPIEIEKPENQDIILLKSEGYKDKFKLINKEKDQVEIEMIKTIKNRLSNKRDKFYINLAVFTLSTIGTIFAGT LLNNAEALYKITGNHFINKILTAEDVYMAKAEQMTAKFLFGAGITLTIGSFISLITHLVEYIKEANLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54742; Mature: 54742
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFKLTLVMPLLIFTIYKIHSQSNIEYNFSYIINTKKENIDLKKGIEKQLNKVYDKITE CCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH HVVSNDDKNIIEDIYINQDIIKTELEISKLKKEMDIKKLQNIINAKEKHNTETKIDELKK HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHH NIQNIKSKKKRFAEYFSNLKKLKVKYKKIEEQTNISNLNKEFFIREELFFISYIDLKKIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEEHHHHHEEEEHHHHHCC NYYLLEISNVTPEKIETEKAVFKTSSSVNEIADKITKHSFKKILGREFLKININVKNNSD CEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCC AKIYINEKFVSKGIYYNNIFDISKIPNKEIEIQITSTNFENYSIKRKVKNADSIILNIDL CEEEEEHHHHHCCCEECCEEECCCCCCCEEEEEEEECCCCCCCHHHHHCCCCEEEEEEEH KRTISKKVEIKSNVKSKVFKKGIFMGETPIEIEKPENQDIILLKSEGYKDKFKLINKEKD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHCCCCH QVEIEMIKTIKNRLSNKRDKFYINLAVFTLSTIGTIFAGTLLNNAEALYKITGNHFINKI HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHH LTAEDVYMAKAEQMTAKFLFGAGITLTIGSFISLITHLVEYIKEANLGE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKFKLTLVMPLLIFTIYKIHSQSNIEYNFSYIINTKKENIDLKKGIEKQLNKVYDKITE CCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH HVVSNDDKNIIEDIYINQDIIKTELEISKLKKEMDIKKLQNIINAKEKHNTETKIDELKK HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHH NIQNIKSKKKRFAEYFSNLKKLKVKYKKIEEQTNISNLNKEFFIREELFFISYIDLKKIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEEHHHHHEEEEHHHHHCC NYYLLEISNVTPEKIETEKAVFKTSSSVNEIADKITKHSFKKILGREFLKININVKNNSD CEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCC AKIYINEKFVSKGIYYNNIFDISKIPNKEIEIQITSTNFENYSIKRKVKNADSIILNIDL CEEEEEHHHHHCCCEECCEEECCCCCCCEEEEEEEECCCCCCCHHHHHCCCCEEEEEEEH KRTISKKVEIKSNVKSKVFKKGIFMGETPIEIEKPENQDIILLKSEGYKDKFKLINKEKD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHCCCCH QVEIEMIKTIKNRLSNKRDKFYINLAVFTLSTIGTIFAGTLLNNAEALYKITGNHFINKI HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHH LTAEDVYMAKAEQMTAKFLFGAGITLTIGSFISLITHLVEYIKEANLGE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA