Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598276

Identifier: 51598276

GI number: 51598276

Start: 12004

End: 12594

Strand: Direct

Name: 51598276

Synonym: BG0013

Alternate gene names: NA

Gene position: 12004-12594 (Clockwise)

Preceding gene: 51598275

Following gene: 51598277

Centisome position: 1.33

GC content: 23.35

Gene sequence:

>591_bases
ATGAGTAACAATATTTTAACTAAAAAACTTTTTCTACTTAAAATTTTGACAAATAATATCGAAGGCAAAATTACAGAAAA
TTTTGAAAAAATAAATAATGAGATTAAACAAAAAATAGAAAAAGTTAAAATTTATCAAAAAAATGAAAATAGCGAAGCAA
CTACAGAAATATCTACAAAAAACAAAAATTTAACAAACTTACTATCAAATAGTAGCTTACAAAAAAAAAGTATCAATGAT
TATATCATAATATATGTAAACAAAAACTATCTCGACGAACCTTCAAGGGATATTATAGTAAAATGGTGCAAAAGCATAAA
CATGCACAATTATAAAATAATAGATACTATTGAATCACTTAACTTAGAAATCAGCAACAAAAACCTTAAAGCAATTTTAT
CTTGCGAAGAAATAGATTTTTTCTTAAATCAACCGCTAAGAATTCAAATTGTAAGAGGAATAGAACTAAGATTTAAAGGC
ATTCCATTGGTTTTTACATACCTTCCTACAAATCAAATAAAAAATCCAGAATTAAAAAAAGAAATATGGCAGGATTTAAA
AATAATCAAAGGCATAATAAAATATGGATGA

Upstream 100 bases:

>100_bases
GAATCAATTTCTACTTTTGAAACAATACTAAAATCAAAAAATAGAAACCTTGCAAGAACAACTGCGCCCGCAAATGCTTT
ATTTTTAGACAAAGTTTACT

Downstream 100 bases:

>100_bases
ACATTATCATTCAACTTATTACTATGAAATTGCAATAAATATTCCTTTAAATAAACTTTTTATTTACAGGTCTAACTTGA
ATCTAGAAATTGGAATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTKNKNLTNLLSNSSLQKKSIND
YIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESLNLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKG
IPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG

Sequences:

>Translated_196_residues
MSNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTKNKNLTNLLSNSSLQKKSIND
YIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESLNLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKG
IPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG
>Mature_195_residues
SNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTKNKNLTNLLSNSSLQKKSINDY
IIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESLNLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKGI
PLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22961; Mature: 22830

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTK
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECC
NKNLTNLLSNSSLQKKSINDYIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESL
CCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHC
NLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKGIPLVFTYLPTNQIKNPELKK
EEEECCCCEEEEEEHHHHHHHHCCCEEEEEEECEEEEECCCCEEEEECCCCCCCCCHHHH
EIWQDLKIIKGIIKYG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTK
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECC
NKNLTNLLSNSSLQKKSINDYIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESL
CCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHC
NLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKGIPLVFTYLPTNQIKNPELKK
EEEECCCCEEEEEEHHHHHHHHCCCEEEEEEECEEEEECCCCEEEEECCCCCCCCCHHHH
EIWQDLKIIKGIIKYG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]