| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598276
Identifier: 51598276
GI number: 51598276
Start: 12004
End: 12594
Strand: Direct
Name: 51598276
Synonym: BG0013
Alternate gene names: NA
Gene position: 12004-12594 (Clockwise)
Preceding gene: 51598275
Following gene: 51598277
Centisome position: 1.33
GC content: 23.35
Gene sequence:
>591_bases ATGAGTAACAATATTTTAACTAAAAAACTTTTTCTACTTAAAATTTTGACAAATAATATCGAAGGCAAAATTACAGAAAA TTTTGAAAAAATAAATAATGAGATTAAACAAAAAATAGAAAAAGTTAAAATTTATCAAAAAAATGAAAATAGCGAAGCAA CTACAGAAATATCTACAAAAAACAAAAATTTAACAAACTTACTATCAAATAGTAGCTTACAAAAAAAAAGTATCAATGAT TATATCATAATATATGTAAACAAAAACTATCTCGACGAACCTTCAAGGGATATTATAGTAAAATGGTGCAAAAGCATAAA CATGCACAATTATAAAATAATAGATACTATTGAATCACTTAACTTAGAAATCAGCAACAAAAACCTTAAAGCAATTTTAT CTTGCGAAGAAATAGATTTTTTCTTAAATCAACCGCTAAGAATTCAAATTGTAAGAGGAATAGAACTAAGATTTAAAGGC ATTCCATTGGTTTTTACATACCTTCCTACAAATCAAATAAAAAATCCAGAATTAAAAAAAGAAATATGGCAGGATTTAAA AATAATCAAAGGCATAATAAAATATGGATGA
Upstream 100 bases:
>100_bases GAATCAATTTCTACTTTTGAAACAATACTAAAATCAAAAAATAGAAACCTTGCAAGAACAACTGCGCCCGCAAATGCTTT ATTTTTAGACAAAGTTTACT
Downstream 100 bases:
>100_bases ACATTATCATTCAACTTATTACTATGAAATTGCAATAAATATTCCTTTAAATAAACTTTTTATTTACAGGTCTAACTTGA ATCTAGAAATTGGAATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTKNKNLTNLLSNSSLQKKSIND YIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESLNLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKG IPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG
Sequences:
>Translated_196_residues MSNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTKNKNLTNLLSNSSLQKKSIND YIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESLNLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKG IPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG >Mature_195_residues SNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTKNKNLTNLLSNSSLQKKSINDY IIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESLNLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKGI PLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIKYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005122 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22961; Mature: 22830
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTK CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECC NKNLTNLLSNSSLQKKSINDYIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESL CCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHC NLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKGIPLVFTYLPTNQIKNPELKK EEEECCCCEEEEEEHHHHHHHHCCCEEEEEEECEEEEECCCCEEEEECCCCCCCCCHHHH EIWQDLKIIKGIIKYG HHHHHHHHHHHHHHCC >Mature Secondary Structure SNNILTKKLFLLKILTNNIEGKITENFEKINNEIKQKIEKVKIYQKNENSEATTEISTK CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECC NKNLTNLLSNSSLQKKSINDYIIIYVNKNYLDEPSRDIIVKWCKSINMHNYKIIDTIESL CCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHC NLEISNKNLKAILSCEEIDFFLNQPLRIQIVRGIELRFKGIPLVFTYLPTNQIKNPELKK EEEECCCCEEEEEEHHHHHHHHCCCEEEEEEECEEEEECCCCEEEEECCCCCCCCCHHHH EIWQDLKIIKGIIKYG HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]