| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is femD
Identifier: 51598267
GI number: 51598267
Start: 3254
End: 5041
Strand: Direct
Name: femD
Synonym: BG0004
Alternate gene names: NA
Gene position: 3254-5041 (Clockwise)
Preceding gene: NA
Following gene: 51598271
Centisome position: 0.36
GC content: 27.46
Gene sequence:
>1788_bases ATGCTTAAACAATATTCACTTAACATGAAGAATTTTAAAAAAGCTTTTGATGAGATGATATTTTCTGCTTCGGGATTTAG AAAAATTTTTGCCAAATCAAAAGATGAAGATTCAACAGAAAATGAAATAGCCAATGAAGATAAAGTACTAATAGCACTAA TATTCTTCACAATATCAAATTATTTTAAAATTGAATCCAGACCCTATATTGGATTAGGATTAGATTCAAGACCAACTGGT AACATTATTGCAGAAATAACAATAAAAATATTAATAACAAGCAAAGAAAAGATTAAGTTTTTTGGCATACTTCCAATAAC TGAAATTTTAGCTTGTACAAAAAACAGCAAAGATTCAAAAGGCTTCATTTATATCTCTGCAAGCCATAATCCAGCAGGTT ACAATGGAATAAAAATAGGGTTAAACGATGGTGGCGTACTAAATTCTGCAAAAACTCAGGAAATAATAAAACAAATTAAA AATAATAGCCAAAATGAAAATTTAATAAAGCATTTAATTAATACCCTGAACAAATTTGATGAAGATAAATCACATTTAGA ATATTATAAAAAAACAATAAAATTAGAAAAAGAAAATAAAAACCAATCTTACGAAGTCTATAAATCATTAATACATGAAA TAGCGTATGAAAACGATATTAACAATAAAAATATCGAAATTTTAAAGAAAAGAATACTAAAAAATCCAATTGGAATAATA GCAGAAATGAATGGAAGCTCTAGAATCAATTCAATAGATAAAGAATTGATAGAATCTTTGGGATTGAAAATAGAATTACA TAATGACAAAATGGGCATTTTTAAGCACAATATTATTCCTGAAGGAAAATCTTTAAATGAATGTAAAAAGCTACTACAAA AAAAATATATAAAAGACAATTCTTTTGAGCTGGGCTATGTACCGGATTGTGATGGAGATAGAGGTAATCTGGTGTTTATA GACAAAGTCACAAACACTCCAAGCATTATCGAAGCACAAAAAATATTTGCACTTGTAGTAATTTCAGAGCTTAGCTATCT TTATTATACAGGAATAAAAAATAACATAGCAATAGTAACCAATGATGCAACATCTCTAAATATTGAAAAAATTGCAAATT TTTTCAACGCCAAAGTTTATAGAGTAGAAGTTGGAGAAGCAAATCTAACAGAAATGGCAGATGATTTAAGAGCCCAGGGA TTTACTGTAAAAATCTCAGGAGAGGGATCAAATGGGGGTTGCATAATATATCCTTCAAGAGTAAGAGACCCAATTACCAC TCTGCTTAGTATCGTAAAATTATTAAAAATGAAAGAACTTTACCAAATATGGTGCAAATTGTCTAAAAACTACTATAAAG AAAAATACAGCTTAAAAGATATTTTAAATACAACAAATTTTTATAGCAATGTAATAGTATCATCCAAGAAAGCCAATTTA ACAAATCTCAAAATAGAAAACCAAGAAATTTTAAAAAGCAATTACGAAAATCTATTGATTAAAGAGATAAAAAGCAACAA ATTATTTCAAGAATTATCAATAGTTGATTATGAAATCATTAACTACGAAGGCAAAATACAATCTAAGATTAGAACAGGAG ATGCCTCGGGAGGATTAAAGGTATTATTAAAAACTAATAAAGAAATCGTTGCAACCTTATGGATGAGAATCTCAAAAACA GAACCAGTAACAAGGGTGCTTAGCGAGGTTATTTATACAAAAAGAAATGCTTTGTTTAAGCTACTAGAATTTAATAAAAG ATTAATAAAAAAGGCAAATCTACTATAA
Upstream 100 bases:
>100_bases ATAAGCAAAAAAACAAATTTTCAAGTATAATGGTATAAGTGACATATTATTGATTATTATAGCAATAATATGACTAGAAT ATCAATGAGAAGAAATTTAA
Downstream 100 bases:
>100_bases TAATTAATATTGTTTGATTTAAATAATAAGTTGATCACAGCTATAAGTCTATCATAAAATTAATAATTTTCATTCTTCAT TTTTTTATTTTTCAACACTA
Product: phosphoglucomutase
Products: alpha-D-glucose 6-phosphate
Alternate protein names: Phosphomannomutase; Phosphohexose Mutase Family Protein
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISNYFKIESRPYIGLGLDSRPTG NIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSKGFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIK NNSQNENLIKHLINTLNKFDEDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDNSFELGYVPDCDGDRGNLVFI DKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQG FTVKISGEGSNGGCIIYPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLKVLLKTNKEIVATLWMRISKT EPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL
Sequences:
>Translated_595_residues MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISNYFKIESRPYIGLGLDSRPTG NIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSKGFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIK NNSQNENLIKHLINTLNKFDEDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDNSFELGYVPDCDGDRGNLVFI DKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQG FTVKISGEGSNGGCIIYPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLKVLLKTNKEIVATLWMRISKT EPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL >Mature_595_residues MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISNYFKIESRPYIGLGLDSRPTG NIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSKGFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIK NNSQNENLIKHLINTLNKFDEDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDNSFELGYVPDCDGDRGNLVFI DKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQG FTVKISGEGSNGGCIIYPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLKVLLKTNKEIVATLWMRISKT EPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL
Specific function: Unknown
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.4.2.2
Molecular weight: Translated: 67838; Mature: 67838
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISN CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCC YFKIESRPYIGLGLDSRPTGNIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSK CEEECCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCC GFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIKNNSQNENLIKHLINTLNKFD CEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC EDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDN EECCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCC SFELGYVPDCDGDRGNLVFIDKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVT CEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEE NDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQGFTVKISGEGSNGGCIIYPSR CCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCEEEECHH VRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLK EEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHEECCCCCCCEE VLLKTNKEIVATLWMRISKTEPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISN CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCC YFKIESRPYIGLGLDSRPTGNIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSK CEEECCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCC GFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIKNNSQNENLIKHLINTLNKFD CEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC EDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDN EECCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCC SFELGYVPDCDGDRGNLVFIDKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVT CEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEE NDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQGFTVKISGEGSNGGCIIYPSR CCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCEEEECHH VRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLK EEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHEECCCCCCCEE VLLKTNKEIVATLWMRISKTEPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: alpha-D-glucose 1-phosphate
Specific reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA