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The map label for this gene is istB [H]

Identifier: 51598159

GI number: 51598159

Start: 4621286

End: 4621615

Strand: Reverse

Name: istB [H]

Synonym: YPTB3872

Alternate gene names: 51598159

Gene position: 4621615-4621286 (Counterclockwise)

Preceding gene: 51598163

Following gene: 51598158

Centisome position: 97.41

GC content: 49.39

Gene sequence:

>330_bases
ATGGTACAGCCTTCCTTTTTTACAGACATACTCAGTTATCTGCCAATGACCAGAGAGGAAGCCAGCCTGTTCTTCCGGCT
ACTGAACCGTCGGTATGAAAAAGCGAGCATCATCCTGACGTCAAATAAAGGCTTCGCAGACTGGGGAGAGATGTTCGGAG
ATAACGTGTTGGCAACGGCGATCCTGGATCGGCTGCTGCATCACTCAACCACGCTGAATATCAAAGGAGAAAGCTACCGG
TTAAAGGAGAAACGCAAATCTGGAGTGCTGGCCAAAAACGCAACGCCAATCAGTGACGATGAAATGGCGGAAAGCGGACA
GCATCAGTAA

Upstream 100 bases:

>100_bases
CAGAACATAAAATAAAACTTTGTTTTCTGAAAAACAGGGAGCGCTCATTAAACCACTCCTGCTCAATCCATTTTTGGCTT
CTGCCAGACCATCACTGGTG

Downstream 100 bases:

>100_bases
AGAAAGCATCTAGCGGGCATGAAAATGGCAAATAACGGTCAAAGAGCGTGGCGTTGACAGGGATCGGTGAAACACCCACG
CTTGATAAGATGTATGCCCG

Product: IS100 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDNVLATAILDRLLHHSTTLNIKGESYR
LKEKRKSGVLAKNATPISDDEMAESGQHQ

Sequences:

>Translated_109_residues
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDNVLATAILDRLLHHSTTLNIKGESYR
LKEKRKSGVLAKNATPISDDEMAESGQHQ
>Mature_109_residues
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDNVLATAILDRLLHHSTTLNIKGESYR
LKEKRKSGVLAKNATPISDDEMAESGQHQ

Specific function: One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 12410; Mature: 12410

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDNVLATA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHHHHH
ILDRLLHHSTTLNIKGESYRLKEKRKSGVLAKNATPISDDEMAESGQHQ
HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDNVLATA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHHHHH
ILDRLLHHSTTLNIKGESYRLKEKRKSGVLAKNATPISDDEMAESGQHQ
HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]