| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yeeP [H]
Identifier: 51598158
GI number: 51598158
Start: 4620606
End: 4621238
Strand: Reverse
Name: yeeP [H]
Synonym: YPTB3871
Alternate gene names: 51598158
Gene position: 4621238-4620606 (Counterclockwise)
Preceding gene: 51598159
Following gene: 51598157
Centisome position: 97.4
GC content: 50.55
Gene sequence:
>633_bases GTGGCGTTGACAGGGATCGGTGAAACACCCACGCTTGATAAGATGTATGCCCGCTTGTACCAACATTGGCTGAATAAGCT GAATAAGCTGAATAAGCTGGATCTGATTGTCTGGGTGCTGAAAGCTGATGATCGTGCCTGGAATGACGATATCCGGTGTT ATCGGCAGTTGGTTTCACAGGGTGCAAATCCCGCCCATTTTCTGTTCGTCCTCAGCCAGGCCGATAAAATAGAGCCTTGC CGAGAATGGGATACTGCAACCCACCAACCTTCTCTGCGGCAGCAGCAGAACCTGCAGGAGAAAGTAACTCTGGTGAATAC CATATTTTCTCCTGTTCATCCTGTCTCGGCGGTTTCTGCCTCTGAAGGTTTCAATATACCTCGGTGGGTCGAAACCCTAA TCGCCGTTTTACCCGACAAAGCCAGCAGTGCGGTTACCCGTCAGCTTGAGCCTGAGTATCGGACGGAGAAGGTGACCACC ATGGCACAGGAGGGCTTTAGCCGCGTTGTAGGCGATATCTTTGACGACAGCGTGGAAGCCCTGTTGGAGTCACACACATT AAGAAAGTGGTTAAAACAGGTCCGCTATCGACTGCTCTCTTTAGCCAAATTGCTCTGGCATCGCTTCTTTTAA
Upstream 100 bases:
>100_bases ACGCAACGCCAATCAGTGACGATGAAATGGCGGAAAGCGGACAGCATCAGTAAAGAAAGCATCTAGCGGGCATGAAAATG GCAAATAACGGTCAAAGAGC
Downstream 100 bases:
>100_bases CGTATGTCTAGAAACCTGTCATGCGTTCGATCTGTTTCGCCGATCGAACACAAGTTTGTTATAGGTTTTGACTATTAATT AATTATTAATGATCGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MALTGIGETPTLDKMYARLYQHWLNKLNKLNKLDLIVWVLKADDRAWNDDIRCYRQLVSQGANPAHFLFVLSQADKIEPC REWDTATHQPSLRQQQNLQEKVTLVNTIFSPVHPVSAVSASEGFNIPRWVETLIAVLPDKASSAVTRQLEPEYRTEKVTT MAQEGFSRVVGDIFDDSVEALLESHTLRKWLKQVRYRLLSLAKLLWHRFF
Sequences:
>Translated_210_residues MALTGIGETPTLDKMYARLYQHWLNKLNKLNKLDLIVWVLKADDRAWNDDIRCYRQLVSQGANPAHFLFVLSQADKIEPC REWDTATHQPSLRQQQNLQEKVTLVNTIFSPVHPVSAVSASEGFNIPRWVETLIAVLPDKASSAVTRQLEPEYRTEKVTT MAQEGFSRVVGDIFDDSVEALLESHTLRKWLKQVRYRLLSLAKLLWHRFF >Mature_209_residues ALTGIGETPTLDKMYARLYQHWLNKLNKLNKLDLIVWVLKADDRAWNDDIRCYRQLVSQGANPAHFLFVLSQADKIEPCR EWDTATHQPSLRQQQNLQEKVTLVNTIFSPVHPVSAVSASEGFNIPRWVETLIAVLPDKASSAVTRQLEPEYRTEKVTTM AQEGFSRVVGDIFDDSVEALLESHTLRKWLKQVRYRLLSLAKLLWHRFF
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfjP and ykfA [H]
Homologues:
Organism=Escherichia coli, GI87081706, Length=210, Percent_Identity=36.1904761904762, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI48994902, Length=208, Percent_Identity=36.5384615384615, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24289; Mature: 24158
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTGIGETPTLDKMYARLYQHWLNKLNKLNKLDLIVWVLKADDRAWNDDIRCYRQLVSQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCCCCHHHHHHHHHHHC GANPAHFLFVLSQADKIEPCREWDTATHQPSLRQQQNLQEKVTLVNTIFSPVHPVSAVSA CCCCHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC SEGFNIPRWVETLIAVLPDKASSAVTRQLEPEYRTEKVTTMAQEGFSRVVGDIFDDSVEA CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLESHTLRKWLKQVRYRLLSLAKLLWHRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALTGIGETPTLDKMYARLYQHWLNKLNKLNKLDLIVWVLKADDRAWNDDIRCYRQLVSQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCCCCHHHHHHHHHHHC GANPAHFLFVLSQADKIEPCREWDTATHQPSLRQQQNLQEKVTLVNTIFSPVHPVSAVSA CCCCHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC SEGFNIPRWVETLIAVLPDKASSAVTRQLEPEYRTEKVTTMAQEGFSRVVGDIFDDSVEA CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLESHTLRKWLKQVRYRLLSLAKLLWHRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]