| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yghU
Identifier: 51597881
GI number: 51597881
Start: 4270434
End: 4271288
Strand: Direct
Name: yghU
Synonym: YPTB3590
Alternate gene names: 51597881
Gene position: 4270434-4271288 (Clockwise)
Preceding gene: 51597879
Following gene: 161760557
Centisome position: 90.0
GC content: 49.24
Gene sequence:
>855_bases ATGATGAAAGATAACGAATACCAACCGCCGAAAATCTGGACGGAAAACAATGCCAGCGGCGGTGTGTGGTCTAAAATCAA TCGTCCGACAGCGGGTGCCCGATATGAAGCTGACCTGCCCGTAGGTAAACACCCGTTGCAGCTCTATTCCATGGGTACAC CGAATGGCCAAAAGGTGACTATTCTGCTGGAAGAGTTGCTGGCGTTGGGGGAGAAAGGCGCAGAATATGATGCCCATTTG ATTCGTATCAGTGAAGGCGAGCAGTTCTCAAGTGGCTTTGTTAGCATCAATCCCAATTCAAAGATTCCGGCCCTGATGGA CTATTCATCCACCCCACCGGTAAGGGTTTTTGAGTCTGGTGCCATTCTGCTTTATTTGGCCGATAAATTCGGTCATTTCT TACCAAAATCTCATGCAGCAAGAACTGAAGCACTCAACTGGCTGTTCTGGCTACAAGGTGCAGCCCCTTATTTGGGTGGC GGTTTTGGGCATTTTTATCACTATGCGCCAGTGAAGATTGAATACGCTATCGACCGTTTCACCATGGAAGCCAAGCGCCA GCTCGATTTACTCAACACTCAGCTCAAAACACATAAGTATATCGCGGGTGATGAGTACACTATTGCGGATATCGCTATCT GGCCGTGGTACGGCAGCTTGGTGCTTGGCTTGCAATATGAAGCGGGTGAATTCCTGGATGTGAAATCCTATACTCACCTG ATTCGTTGGACAGAGACCATCGCGAAACGCCCTGCGGTGCAACGTGGTCGCATCGTTAACCGTACTTGGGGTGCGCCAGA AGAGCAATTACCTGAGCGCCATGATGCAGCAGATTTTGACCCACTCATAAAGTAA
Upstream 100 bases:
>100_bases GAGTTGCAGGAAGGCGGCACCCGAGAGACCAATCGTCAGGAACCGATTTGAACGCAGCTTGAAGTATGACGAGTCTATTC ATTCTCAAATAAGGTAATCC
Downstream 100 bases:
>100_bases GTTTACTTAGCTAATAAAAGATCTGACTTGATAAAAAAACACCGCGCGGCCATACCGTTGCGGTGTTTCTCTTTCACGCG GGCTATCATGAGTATTGATT
Product: glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MMKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTILLEELLALGEKGAEYDAHL IRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGAILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGG GFGHFYHYAPVKIEYAIDRFTMEAKRQLDLLNTQLKTHKYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHL IRWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDPLIK
Sequences:
>Translated_284_residues MMKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTILLEELLALGEKGAEYDAHL IRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGAILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGG GFGHFYHYAPVKIEYAIDRFTMEAKRQLDLLNTQLKTHKYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHL IRWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDPLIK >Mature_284_residues MMKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTILLEELLALGEKGAEYDAHL IRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGAILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGG GFGHFYHYAPVKIEYAIDRFTMEAKRQLDLLNTQLKTHKYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHL IRWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDPLIK
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=279, Percent_Identity=70.6093189964158, Blast_Score=424, Evalue=1e-120, Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=40.3755868544601, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI87081789, Length=197, Percent_Identity=29.4416243654822, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=255, Percent_Identity=30.9803921568627, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571670, Length=181, Percent_Identity=29.8342541436464, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI17864592, Length=207, Percent_Identity=28.0193236714976, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32070; Mature: 32070
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVT CCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEE ILLEELLALGEKGAEYDAHLIRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESG HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCEEEECCC AILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGGFGHFYHYAPVKIEYAIDRF EEEEEEECHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHEEECCEEEEEEHHHH TMEAKRQLDLLNTQLKTHKYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHL HHHHHHHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCEEEEEEEECCCCEEEHHHHHHH IRWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDPLIK HHHHHHHHHCCCHHCCCEEECCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MMKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVT CCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEE ILLEELLALGEKGAEYDAHLIRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESG HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCEEEECCC AILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGGFGHFYHYAPVKIEYAIDRF EEEEEEECHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHEEECCEEEEEEHHHH TMEAKRQLDLLNTQLKTHKYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHL HHHHHHHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCEEEEEEEECCCCEEEHHHHHHH IRWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDPLIK HHHHHHHHHCCCHHCCCEEECCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]