| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597879
Identifier: 51597879
GI number: 51597879
Start: 4267510
End: 4268685
Strand: Direct
Name: 51597879
Synonym: YPTB3588
Alternate gene names: NA
Gene position: 4267510-4268685 (Clockwise)
Preceding gene: 51597878
Following gene: 51597881
Centisome position: 89.94
GC content: 45.83
Gene sequence:
>1176_bases ATGAAAAAACTCATTAAACGGCTGGAGATCATCAAAAGCGGTATTGAGCTTGAAGATGACGACATTATTCGCCACCAACT CCCCTATCTTAAAAGTGAGACTCAGGACCCTGTGCTGGTTTTTATCGTCATGGCGATTGAACAGGGAAAATTCACCCAAG CTTTGGATGCGATTGCAACCTGGCTGGGAAGCAAGCAAGGGGTCATACAGTGGCAGGATATTGAACTGGCCGCTTGCAAG CTTGAACTGAAAGCCCTGGAGGAACAGTTAAGCGAATTAATTGATAAACGTAATGAGCGTATTCAGCTACTGGATGACTT TAACGATCTCTATCTGGTGCGCCTTGGCCCGTTGATGAAGCAAATCCTTAACCTGCGTAGGCAGCTGGCAGAAAGCACTT TACGTAAAGCCGAAGCAGAAGCCCGACGCAGAGAACGCGACTATCGCAATTGCCAACAATATATTTCTCAAGCGATAGAC GAACTTATCTCGTTAAAACAGCGGTGGTTGGCTCTCCCTTCTATTTCCAATGACACTATTGAGATACGAAACCGAATTCA GCAACAGACAGAATTGATTACCGCATTACTGGCTGAAATTAAAGAATTGGAAAATAGCTTTTGCACACGGAATACCGAGT CAACACGCAAAGCCCGTGAAGAAGCAAAAGAGAAATACGAACGTTATCAAGAACAGCAGACTGATGCAGAACAACGACTT GATAATGATAGGAAACTCTCTTCTGAGCAACGCCAGAATCTCAAACGGTTGTGGCGGCAAGCCAGCCGGCTTTGCCATCC CGATCTCGTGGCTGATGCGTTTAAAGAAAAAGCCCATCAATTGATGGTTCAACTCAATCAAGCCCGCCAACGAGGTGACT TCCCCGCTATTCACGCGTTGCTGAAGAGTTTAAAGCAAGGGCTTGAGCCACTGATGGCCAGCGATCTTATCGATGATCTT GAACGGTTACGCAGAAAAATCAGCGATGTGCGGACACAAATTGACGCGATATTACACGAGATCGACGCGCTGAAAGGAGA AGAGTCATGGCGGCTTGCCACCTCTTTGCCTGACAAAGATAAATGGTTCAAAGAACAAGAAAATGTCTTATCCAAGACAC TTAACATTCTTGAGCGGCAAGTCGAGGAAGCATCAAGAGTGCTCTATGAAGCATAA
Upstream 100 bases:
>100_bases CACCATCCTTGCGGGATCCCCCTTCATTCATCTGGAACAATGTGAAACCGTTGTTTAGTATGTCGGTATTCTGCCTACGT TATCAGCAAATCCTATATTT
Downstream 100 bases:
>100_bases CGCTATGAAACATAGTTCGCTGAAACATAGTTCGCTGAAGCATAATTCTATGAAACATAATATTGTCTTAAAGCGTAAAA AACCCGCGCATGGACTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIATWLGSKQGVIQWQDIELAACK LELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMKQILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAID ELISLKQRWLALPSISNDTIEIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL DNDRKLSSEQRQNLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHALLKSLKQGLEPLMASDLIDDL ERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKDKWFKEQENVLSKTLNILERQVEEASRVLYEA
Sequences:
>Translated_391_residues MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIATWLGSKQGVIQWQDIELAACK LELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMKQILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAID ELISLKQRWLALPSISNDTIEIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL DNDRKLSSEQRQNLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHALLKSLKQGLEPLMASDLIDDL ERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKDKWFKEQENVLSKTLNILERQVEEASRVLYEA >Mature_391_residues MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIATWLGSKQGVIQWQDIELAACK LELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMKQILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAID ELISLKQRWLALPSISNDTIEIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL DNDRKLSSEQRQNLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHALLKSLKQGLEPLMASDLIDDL ERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKDKWFKEQENVLSKTLNILERQVEEASRVLYEA
Specific function: Unknown
COG id: COG1076
COG function: function code O; DnaJ-domain-containing proteins 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45862; Mature: 45862
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIAT CHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH WLGSKQGVIQWQDIELAACKLELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMK HHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH QILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAIDELISLKQRWLALPSISNDTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DNDRKLSSEQRQNLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHAL CCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LKSLKQGLEPLMASDLIDDLERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHH KWFKEQENVLSKTLNILERQVEEASRVLYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIAT CHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH WLGSKQGVIQWQDIELAACKLELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMK HHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH QILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAIDELISLKQRWLALPSISNDTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DNDRKLSSEQRQNLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHAL CCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LKSLKQGLEPLMASDLIDDLERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHH KWFKEQENVLSKTLNILERQVEEASRVLYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA