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The map label for this gene is yjgF [H]

Identifier: 51597825

GI number: 51597825

Start: 4199134

End: 4199520

Strand: Direct

Name: yjgF [H]

Synonym: YPTB3533

Alternate gene names: 51597825

Gene position: 4199134-4199520 (Clockwise)

Preceding gene: 51597824

Following gene: 51597826

Centisome position: 88.5

GC content: 48.58

Gene sequence:

>387_bases
ATGTCACGTGTTATCAGTACTGAACTCGCCCCTGCTGCTATTGGCCCTTATGTTCAAGGTGTCGATCTGGGCAGCATGAT
CATCACTTCCGGTCAGATCCCGGTCGATCCAAAAACCGGCTTAGTCGCTGATGATATTGCCGCTCAGGCTCGTCAGTCAC
TGGAAAACGTGAAAGCCATTGTTGAAGCGGCTGGCCTAAACGTTGCCGATATCGTGAAAACCACCGTATTCGTTAAAGAT
CTGAATGATTTCAGTACCGTTAACGCAACTTACGAAGCCTTCTTTACAGAACACAGCGCCCCATTCCCAGCCCGTTCTTG
TGTTGAAGTGGCCCGTTTACCCAAAGATGTAAAAATCGAAATCGAAGCCATCGCAGTACGTCGTTAA

Upstream 100 bases:

>100_bases
GGCTAACTTCGCCCCACGGGTTGCTGTAATTCAGTTCGCCTTTATAATGGTCGGGATCATTATGATATCCCTTTCCGCAT
TACGTAAATCAGGAGTCAAC

Downstream 100 bases:

>100_bases
TCCCTCCCCCATCACCACATACGGCTGGTTATCGCCAGCCGTATGTGGTGATTTTATTTCTCTCCTCTCTGTCTCTCTCT
TCCCATTCCATGACCGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSRVISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGLVADDIAAQARQSLENVKAIVEAAGLNVADIVKTTVFVKD
LNDFSTVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIEIEAIAVRR

Sequences:

>Translated_128_residues
MSRVISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGLVADDIAAQARQSLENVKAIVEAAGLNVADIVKTTVFVKD
LNDFSTVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIEIEAIAVRR
>Mature_127_residues
SRVISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGLVADDIAAQARQSLENVKAIVEAAGLNVADIVKTTVFVKDL
NDFSTVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIEIEAIAVRR

Specific function: May have a phosphotransferase activity [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=126, Percent_Identity=49.2063492063492, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI87082396, Length=128, Percent_Identity=87.5, Blast_Score=227, Evalue=2e-61,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=69.2913385826772, Blast_Score=187, Evalue=2e-49,
Organism=Escherichia coli, GI1787245, Length=115, Percent_Identity=31.304347826087, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982075, Length=124, Percent_Identity=42.741935483871, Blast_Score=111, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI25148896, Length=124, Percent_Identity=42.741935483871, Blast_Score=111, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI71982068, Length=124, Percent_Identity=42.741935483871, Blast_Score=111, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6322138, Length=124, Percent_Identity=39.5161290322581, Blast_Score=94, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6320899, Length=106, Percent_Identity=42.4528301886792, Blast_Score=91, Evalue=5e-20,
Organism=Drosophila melanogaster, GI19921376, Length=125, Percent_Identity=42.4, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13642; Mature: 13511

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGLVADDIAAQARQSLENVKAI
CCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VEAAGLNVADIVKTTVFVKDLNDFSTVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIE
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEE
IEAIAVRR
EEEEEECC
>Mature Secondary Structure 
SRVISTELAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGLVADDIAAQARQSLENVKAI
CCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VEAAGLNVADIVKTTVFVKDLNDFSTVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIE
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEE
IEAIAVRR
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]