| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is pyrI
Identifier: 51597824
GI number: 51597824
Start: 4198529
End: 4198996
Strand: Direct
Name: pyrI
Synonym: YPTB3532
Alternate gene names: 51597824
Gene position: 4198529-4198996 (Clockwise)
Preceding gene: 51597823
Following gene: 51597825
Centisome position: 88.49
GC content: 48.29
Gene sequence:
>468_bases ATGATGACTCAGGATTACAAACTTCAGGTTGAAGCGATTAAATGCGGCACCGTGATTGACCATATTCCAGCTCAAATCGG CTTTAAATTGCTCTCACTGTTTAAGCTAACGGCAACCGACCAGCGCATCACCATTGGCTTGAATCTGCCGTCTAAACGTT CTGGTCGTAAGGATCTGATTAAGATCGAGAACACTTTCCTGACCGAGCAACAAGCGAACCAGTTGGCAATGTATGCTCCA GATGCAACCGTCAATCGTATCGATAACTACGAAGTAGTGAAGAAGCTGACCCTCAGCCTGCCAGAGCGTATCGATGCGGT ACTGACGTGCCCAAACAGCAACTGTATCAGCCACAACGAACCCGTCGACTCCAGCTTTACCGTCAAAGCGCAGCGAGGCG AAATTAGCCTGAAGTGCAAATATTGTGAGAAAGAGTTCGATCACCTGGCCGTACTACACGCTGATTGA
Upstream 100 bases:
>100_bases CCTACGCCTACTATTTCCAACAAGCGGGTAACGGTATTTTTGCACGTCAGGCGCTACTGGCACTGGTATTAAACGCAGAA TTAGCTCTTTAAGGGGAATG
Downstream 100 bases:
>100_bases TAACGGTAAGCCCGTAATATTCATCCCAATGGGCAGTGGCTAACTTCGCCCCACGGGTTGCTGTAATTCAGTTCGCCTTT ATAATGGTCGGGATCATTAT
Product: aspartate carbamoyltransferase regulatory subunit
Products: phosphate; N-carbamoyl-L-aspartate
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MMTQDYKLQVEAIKCGTVIDHIPAQIGFKLLSLFKLTATDQRITIGLNLPSKRSGRKDLIKIENTFLTEQQANQLAMYAP DATVNRIDNYEVVKKLTLSLPERIDAVLTCPNSNCISHNEPVDSSFTVKAQRGEISLKCKYCEKEFDHLAVLHAD
Sequences:
>Translated_155_residues MMTQDYKLQVEAIKCGTVIDHIPAQIGFKLLSLFKLTATDQRITIGLNLPSKRSGRKDLIKIENTFLTEQQANQLAMYAP DATVNRIDNYEVVKKLTLSLPERIDAVLTCPNSNCISHNEPVDSSFTVKAQRGEISLKCKYCEKEFDHLAVLHAD >Mature_155_residues MMTQDYKLQVEAIKCGTVIDHIPAQIGFKLLSLFKLTATDQRITIGLNLPSKRSGRKDLIKIENTFLTEQQANQLAMYAP DATVNRIDNYEVVKKLTLSLPERIDAVLTCPNSNCISHNEPVDSSFTVKAQRGEISLKCKYCEKEFDHLAVLHAD
Specific function: Involved in allosteric regulation of aspartate carbamoyltransferase [H]
COG id: COG1781
COG function: function code F; Aspartate carbamoyltransferase, regulatory subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrI family [H]
Homologues:
Organism=Escherichia coli, GI1790692, Length=151, Percent_Identity=78.8079470198676, Blast_Score=242, Evalue=8e-66,
Paralogues:
None
Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020545 - InterPro: IPR002801 - InterPro: IPR020542 - ProDom: PD006194 [H]
Pfam domain/function: PF01948 PyrI; PF02748 PyrI_C [H]
EC number: 2.1.3.2
Molecular weight: Translated: 17438; Mature: 17438
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTQDYKLQVEAIKCGTVIDHIPAQIGFKLLSLFKLTATDQRITIGLNLPSKRSGRKDLI CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEE KIENTFLTEQQANQLAMYAPDATVNRIDNYEVVKKLTLSLPERIDAVLTCPNSNCISHNE EECCEEECCCCCCEEEEECCCCHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC PVDSSFTVKAQRGEISLKCKYCEKEFDHLAVLHAD CCCCCEEEEEECCCEEEEEEECCCCCCEEEEEECC >Mature Secondary Structure MMTQDYKLQVEAIKCGTVIDHIPAQIGFKLLSLFKLTATDQRITIGLNLPSKRSGRKDLI CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEE KIENTFLTEQQANQLAMYAPDATVNRIDNYEVVKKLTLSLPERIDAVLTCPNSNCISHNE EECCEEECCCCCCEEEEECCCCHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC PVDSSFTVKAQRGEISLKCKYCEKEFDHLAVLHAD CCCCCEEEEEECCCEEEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: carbamoyl phosphate; L-aspartate
Specific reaction: carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA