Click here to switch to the map view.

The map label for this gene is yraP [H]

Identifier: 51597788

GI number: 51597788

Start: 4161783

End: 4162358

Strand: Direct

Name: yraP [H]

Synonym: YPTB3496

Alternate gene names: 51597788

Gene position: 4161783-4162358 (Clockwise)

Preceding gene: 51597787

Following gene: 161760559

Centisome position: 87.71

GC content: 51.56

Gene sequence:

>576_bases
ATGAAGGTTGGTTACATATTTGCCATGCTATTCAGCACCCTACTTTTACAGGGCTGTGTCGGCGCAGTGGTCGTCGGTAG
TGCGGCGGTTGCCACAAAAACCGCCACGGATCCACGTACCATCGGTACGCAGGTAGATGACGGCACACTGGAAGCCAGGG
TCGTTAATGCCCTGAGCAAAGATAAGGAAATCAAGAGCCAAACACGATTTGTGGTCACGGCTTATCAGGGAAAAGTATTG
CTAACCGGGCAAACCCCATCAGCGGAGCTGTCTAACCGCGCTAAGCAGATCGCCTCTGGTGTCGATGGTGCAACGGAAGT
CTACAACGAGATGCGTTTGGGGAAACCGGTTGATCTGAGCACCGCGTCAATGGATACCTGGATCACAACCAAAGTACGTT
CACAGCTACTCACCAGTGATTCGGTTAAATCCTCTAACGTCAAAGTGACGACGGAGAACGGCGAAGTCTTCTTATTGGGC
TTGGTCACTCAACAAGAAGCGCAATCGGCGGCACAGATAGCCAGCAAGGTCAGCGGCGTTAAACACGTCACGACGGCCTT
CACTATTGTTAAATAA

Upstream 100 bases:

>100_bases
GGAGCCAGGGTTCAAGAACTGCACATGCTCACAGTGAATTGTTTGTGTGACTTAATTGACAACACTCTATTTCCTCATCA
GGACGATTAAAGGAGCACCA

Downstream 100 bases:

>100_bases
GATCCTGTTTTAAAGAAGATTAAATAAGATTTATCACGGGCTTAGCGCTAAACCGCCAAGCCCGTTTTTTATCCACCACA
TCGATACCCAATATCATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKVGYIFAMLFSTLLLQGCVGAVVVGSAAVATKTATDPRTIGTQVDDGTLEARVVNALSKDKEIKSQTRFVVTAYQGKVL
LTGQTPSAELSNRAKQIASGVDGATEVYNEMRLGKPVDLSTASMDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLG
LVTQQEAQSAAQIASKVSGVKHVTTAFTIVK

Sequences:

>Translated_191_residues
MKVGYIFAMLFSTLLLQGCVGAVVVGSAAVATKTATDPRTIGTQVDDGTLEARVVNALSKDKEIKSQTRFVVTAYQGKVL
LTGQTPSAELSNRAKQIASGVDGATEVYNEMRLGKPVDLSTASMDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLG
LVTQQEAQSAAQIASKVSGVKHVTTAFTIVK
>Mature_191_residues
MKVGYIFAMLFSTLLLQGCVGAVVVGSAAVATKTATDPRTIGTQVDDGTLEARVVNALSKDKEIKSQTRFVVTAYQGKVL
LTGQTPSAELSNRAKQIASGVDGATEVYNEMRLGKPVDLSTASMDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLG
LVTQQEAQSAAQIASKVSGVKHVTTAFTIVK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=191, Percent_Identity=73.8219895287958, Blast_Score=262, Evalue=9e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20187; Mature: 20187

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGYIFAMLFSTLLLQGCVGAVVVGSAAVATKTATDPRTIGTQVDDGTLEARVVNALSK
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
DKEIKSQTRFVVTAYQGKVLLTGQTPSAELSNRAKQIASGVDGATEVYNEMRLGKPVDLS
HHHHHHHCEEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
TASMDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLGLVTQQEAQSAAQIASKVSGV
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCH
KHVTTAFTIVK
HHHHHEEEEEC
>Mature Secondary Structure
MKVGYIFAMLFSTLLLQGCVGAVVVGSAAVATKTATDPRTIGTQVDDGTLEARVVNALSK
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
DKEIKSQTRFVVTAYQGKVLLTGQTPSAELSNRAKQIASGVDGATEVYNEMRLGKPVDLS
HHHHHHHCEEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
TASMDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLGLVTQQEAQSAAQIASKVSGV
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCH
KHVTTAFTIVK
HHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]