| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is diaA [H]
Identifier: 51597787
GI number: 51597787
Start: 4161182
End: 4161772
Strand: Direct
Name: diaA [H]
Synonym: YPTB3495
Alternate gene names: 51597787
Gene position: 4161182-4161772 (Clockwise)
Preceding gene: 51597786
Following gene: 51597788
Centisome position: 87.7
GC content: 49.92
Gene sequence:
>591_bases GTGCTGGAAAGAATCAAAGGCTGCTTTACTGAAAGTATTCAAACCCAGATTGCGGCGGCGGAAGCTCTGCCTGATGCTAT ATCCTGTGCAGCGATGGCGCTGGTCCAGTCATTGCTCAACGGCAATAAAATTCTCTGCTGTGGTAACGGGACTTCTGCAG CGAATGCACAGCATTTTGCTGCCAGTATGATAAATCGCTTTGAAACCGAGCGGCCAAGTCTGCCCGCTATCGCTCTGAAT GCCGATAATGTTGTTTTGACGGCGATCACTAACGATCGTTTACATGACGAGGTTTACGCCAAACAAGTACGGGCGCTCGG CCAGGCCGGGGATGTTTTGCTCGCTATTTCCACTCGTGGCAATAGCCGTGATATTGTTAAAGCGGTCGAAGCAGCAGTTA CCCGGGATATGACCATTGTCGCGCTCACCGGTTATGATGGCGGCGAACTGGCTGGTCTGTTAGGTCAGTTGGATGTCGAA ATCCGTATTCCTTCACACCGTGGAGCCAGGGTTCAAGAACTGCACATGCTCACAGTGAATTGTTTGTGTGACTTAATTGA CAACACTCTATTTCCTCATCAGGACGATTAA
Upstream 100 bases:
>100_bases TCAACGACCAGTAAGTGATTCGGGTTATTGAGCGTCGCCAACGCACATACAGCTTGAAGTATGACGGGTATATTAATTTT ACTGAATGGGTTAAATCAAC
Downstream 100 bases:
>100_bases AGGAGCACCAATGAAGGTTGGTTACATATTTGCCATGCTATTCAGCACCCTACTTTTACAGGGCTGTGTCGGCGCAGTGG TCGTCGGTAGTGCGGCGGTT
Product: DnaA initiator-associating protein DiaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLERIKGCFTESIQTQIAAAEALPDAISCAAMALVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALN ADNVVLTAITNDRLHDEVYAKQVRALGQAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQLDVE IRIPSHRGARVQELHMLTVNCLCDLIDNTLFPHQDD
Sequences:
>Translated_196_residues MLERIKGCFTESIQTQIAAAEALPDAISCAAMALVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALN ADNVVLTAITNDRLHDEVYAKQVRALGQAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQLDVE IRIPSHRGARVQELHMLTVNCLCDLIDNTLFPHQDD >Mature_196_residues MLERIKGCFTESIQTQIAAAEALPDAISCAAMALVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALN ADNVVLTAITNDRLHDEVYAKQVRALGQAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQLDVE IRIPSHRGARVQELHMLTVNCLCDLIDNTLFPHQDD
Specific function: Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein [H]
COG id: COG0279
COG function: function code G; Phosphoheptose isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1789539, Length=196, Percent_Identity=93.8775510204082, Blast_Score=374, Evalue=1e-105, Organism=Escherichia coli, GI1786416, Length=167, Percent_Identity=41.3173652694611, Blast_Score=130, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023070 - InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 20939; Mature: 20939
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERIKGCFTESIQTQIAAAEALPDAISCAAMALVQSLLNGNKILCCGNGTSAANAQHFA CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH ASMINRFETERPSLPAIALNADNVVLTAITNDRLHDEVYAKQVRALGQAGDVLLAISTRG HHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCC NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQLDVEIRIPSHRGARVQELHMLTVN CCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHH CLCDLIDNTLFPHQDD HHHHHHHCCCCCCCCC >Mature Secondary Structure MLERIKGCFTESIQTQIAAAEALPDAISCAAMALVQSLLNGNKILCCGNGTSAANAQHFA CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH ASMINRFETERPSLPAIALNADNVVLTAITNDRLHDEVYAKQVRALGQAGDVLLAISTRG HHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCC NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQLDVEIRIPSHRGARVQELHMLTVN CCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHH CLCDLIDNTLFPHQDD HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA