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The map label for this gene is arpB [H]

Identifier: 51597605

GI number: 51597605

Start: 3937849

End: 3939339

Strand: Direct

Name: arpB [H]

Synonym: YPTB3305

Alternate gene names: 51597605

Gene position: 3937849-3939339 (Clockwise)

Preceding gene: 51597602

Following gene: 51597608

Centisome position: 83.0

GC content: 33.07

Gene sequence:

>1491_bases
ATGGATATTTTTTCAAGTTTTAACTTATACAATAAAGAAGTGTATAGTAACAGTCCCACACACCCTACCTTTGACAAAAG
CAAGCCGTATATATCAGAATTAAAAAGTCGTGAAGAGAAAAATCTAAACGGTGAAGTCAACTTTAAAGACAATGTTGACA
AACTGATTATGTGCCGTCATCTATCAAGTCAATATATATTGGATTCATTATCCGATGAGGATACCGGAAAGGTTGATTTA
GATAAATTCTCATCCAAAGACATCATCGCAAACCGAATAACTAGCAACGTTGAAGAGCTTTACGAGCAACTTCAGTTGCA
AGCAAAAGAAATTTATTTTATTCCTAACAATGAATTTGGCATCTGTCTCAGTAAGATCTTTAAGAGTATGGAGAGAAAGT
CAGAAAATACTCAATCCATACTACTTGAGTCATTCAACCACGCGATGGCAGTAAGATTGAGAATCAAGGAAAATGAAAAC
AACAACACGAAAAGGTACGTCATTAGTGTTTATGACCCCAACATGACTAATGTTACTGTCCGCTGTGAGGTGGATGATTT
AGTTAAAGTGAGAGATTTTCAGGTGAAGGATTTTATTAATCATCATTTATTTGGCAACTTTTACAAGAGCTACTACCCAA
CTGAATCAAGTGAAATATCAACCCTTTATATTTGTAAAAAACCAGCTAACGAAAGTGTTCCTGAGTGTACAGGGAAAAAA
ATTACATTTTATGATTGGATAGCCTTACCTGCCTCGTCTATTAATTTATACACTTTCCTCATTGAGGGATTCTCACAAGA
AATTAAAAATCTAAAAAATCAATTAGAAATAATATATAAGAAAAACCCGGAAAAGCTGATGGAAATACTTACCGCTAAAA
GTCCCGATGGAATAATGGGTTTTGAACAAGCATTACTTAATGATCACGCTGATGCCATAAACGCATTTGGCGAGCTGCTA
CAATTAGTTCCCGAAAACAAACGCAGTGAATTACTTGTAAATAATAAAAAAACAAAGTACACATTATTTGATATAGTTTG
TTCTAGAGAAAAAAATAAAACAACAATGGCATTCAAAAATATAGTGTCACTTATCTCTAAAAATGAGCGTTATAAATTAA
TAGAATCAAAAGTAAACATACTTGATACTGTTATTAATTCACTTATTACCAAAAAAGACAGTAGTCATCTTAACGAAATT
TTTGAATTAATCTCATTAGCGCCAGAAGAGCATGTCATCAACTTACTGTCCAATATAGATATAACGCAATCTCTTGAATA
TTCGTTATATCACAATGATACTAAATCGATAAATATCATCACTAAAATGCTCAAGGGATTATCTGAACAAGGTCGGGAAA
ATATACCTTTTCTGAGAAAATTAGATGAGTCTATAGTGAATATGTATATCCAACTCGGTAAAAAAATAGCCGTTTCTGCC
TACCGTGAATTATTGGCACTGAAACCGGGAACGCTCAAAGAGAGTAAATAG

Upstream 100 bases:

>100_bases
AATCATTAATATACAGATTTTACCTTATTTTATATTTAGATAACTTCCTGGAAAATATCAATTATATATTTTTCGATTCC
GTCAAAAAACAGGATGAAAT

Downstream 100 bases:

>100_bases
CCATTCAGTCACTGCCCCCAAAGAGTCACCCATACCCACCGGTCTTAACCGGCGGGTATGGGCTTTATGACAAAACAGCA
TTAAATCCAAAGGATTGGAT

Product: enterotoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MDIFSSFNLYNKEVYSNSPTHPTFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFGICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKENEN
NNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTGKK
ITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMGFEQALLNDHADAINAFGELL
QLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEI
FELISLAPEEHVINLLSNIDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKKIAVSA
YRELLALKPGTLKESK

Sequences:

>Translated_496_residues
MDIFSSFNLYNKEVYSNSPTHPTFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFGICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKENEN
NNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTGKK
ITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMGFEQALLNDHADAINAFGELL
QLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEI
FELISLAPEEHVINLLSNIDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKKIAVSA
YRELLALKPGTLKESK
>Mature_496_residues
MDIFSSFNLYNKEVYSNSPTHPTFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFGICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKENEN
NNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTGKK
ITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMGFEQALLNDHADAINAFGELL
QLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEI
FELISLAPEEHVINLLSNIDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKKIAVSA
YRELLALKPGTLKESK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=368, Percent_Identity=23.9130434782609, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 57208; Mature: 57208

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFSSFNLYNKEVYSNSPTHPTFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRH
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LSSQYILDSLSDEDTGKVDLDKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFG
CCHHHHHHHCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
ICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKENENNNTKRYVISVYDPNMTNVTV
HHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
RCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTGKK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCE
ITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHH
FEQALLNDHADAINAFGELLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKN
HHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHCCCCCCHHHHHHH
IVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEIFELISLAPEEHVINLLSNID
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC
ITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKKIAVSA
HHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YRELLALKPGTLKESK
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDIFSSFNLYNKEVYSNSPTHPTFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRH
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LSSQYILDSLSDEDTGKVDLDKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFG
CCHHHHHHHCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
ICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKENENNNTKRYVISVYDPNMTNVTV
HHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
RCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTGKK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCE
ITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHH
FEQALLNDHADAINAFGELLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKN
HHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHCCCCCCHHHHHHH
IVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEIFELISLAPEEHVINLLSNID
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC
ITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKKIAVSA
HHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YRELLALKPGTLKESK
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]