| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597555
Identifier: 51597555
GI number: 51597555
Start: 3830413
End: 3831957
Strand: Reverse
Name: 51597555
Synonym: YPTB3251
Alternate gene names: NA
Gene position: 3831957-3830413 (Counterclockwise)
Preceding gene: 51597556
Following gene: 51597554
Centisome position: 80.76
GC content: 55.15
Gene sequence:
>1545_bases ATGTCTGTACAGGAAAACCGTGCGCAGGGTACTGCGACGACCGTATTAAAGAATAGCCCTGCGGCACAAGGGGTTTACGC CGCCTTGTTTGAAAAAATCAACCTGAGCCCGGTCTCCTCACTGGCCGGTATCGAGGCGTTCCAGAACAACGATGCGCTGG CGGAAGCCACCACCGATGAGCGCGTTACCGCCGCCGTCAGTGTCTTTTTAGACCTGCTGAAGCAGTCGGCGAAGAAAGTA GAAAAACTGGATAAAACCCTGCTGGACGGCCATATTGCCGCACTGGATGACCAAATCAGCCGCCAGTTGGACGCGGTAAT GCACCACCCCGATTTCCAGCGGGTGGAATCGACCTGGCGTGGTGTGAAGTCGCTGATCGATCAGACCGATTTCCGCCAGA ACGTGCGCATCGAGCTGCTGGATATCAGTAAAGATCATCTGGTGCAGGATTTTGAAGATGCCCCGGAAATCTCACAAAGC GGTTTATACGCCCAGACCTATATTCAGGAATACGACACCCCCGGCGGCGAGCCGATTGCCGCGGCTATCTCCAACTACGA GTTCGACCGCAGCCCGCAAGATATCGCCTTATTGCGCAATATCTCCAAAGTGGCGGCTGCAGCCCATATGCCGTTTATCG GCTCAGTGGGTCCGGCGTTCTTTGGTAAAGAGAACATGGAAGAGGTGGCGGCCATCAAAGATATCGGCAACTACTTTGAC CGCGCTGAATACATCAAATGGAAAGCTTTCCGCGACTCGGATGATTCCCGCTATATCGGCCTGACCATGCCGCGCGTGCT GGGGCGTTTGCCTTACGGGCCAGATACCGTGCCGGTGCGCAGCTTTAACTACGTAGAGCAGGTGAAAGGGCCGGATCATG AGCGTTATCTGTGGACCAACGCTTCGTTTGCCTTTGCTGCCAACATGGTGAAAAGCTTCATTAAAAATGGCTGGTGCGTA CAGATCCGTGGGCCACAAGCCGGTGGTGCAGTCACCAACCTGCCAATCCACCTGTACGATCTGGGTACCGGTAATCAGGT CAAAATTCCGTCAGAGGTGATGATCCCGGAAACCCGCGAGTTCGAGTTTGCCAATCTGGGCTTTATCCCGCTGTCGTACT ACAAAAACCGCGATTACTCGTGCTTCTTCTCGGCCAACTCGGCGCAGAAACCGGCGCTGTATGACACCGCGGATGCCACG GCCAACAGCCGCATCAACGCCCGTTTGCCGTATATCTTCCTGCTGTCGCGCATTGCCCATTATCTGAAACTGATCCAGCG CGAGAACATCGGCACCACCAAAGATCGCCGTCTGCTGGAGCTGGAGCTGAACAACTGGGTGCGCGGGCTGGTGACGGAAA TGACTGATCCGGGTGATGATTTGCAGGCGTCCCATCCCCTGCGTGATGCCAAAGTGACGGTCGAAGATATCGAAGACAAC CCCGGCTTCTTCCGCGTCAAGCTGTATGCGGTGCCGCATTTCCAGGTGGAAGGGATGGACGTCAATCTGTCATTGGTTTC CCAAATGCCAAAGGCTAAGGCATAA
Upstream 100 bases:
>100_bases GAGCGATGAACTGCGCGCTGAACTGGCGGCCCTGGCGCCAAAAGAGGGTTAATCCCGGGATTGGCTGCTTGTCATTAGAA AGAAGAAAAGGAACATGCTG
Downstream 100 bases:
>100_bases ACGGCGACACGATGAAAATTGAACGCCCTCTGTGGGCTCGCGGGATCCTGGTGTCTCCGCAACAATTTCAACAACAGGCT TCCTGGGAGGCCTGGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAKKV EKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQS GLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFD RAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGWCV QIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADAT ANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Sequences:
>Translated_514_residues MSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAKKV EKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQS GLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFD RAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGWCV QIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADAT ANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA >Mature_513_residues SVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAKKVE KLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSG LYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFDR AEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGWCVQ IRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATA NSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDNP GFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57487; Mature: 57355
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDE CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCH RVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEPIA HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCHHH AAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFD HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH RAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTN HHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEC ASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETRE CHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCC FEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAH CCEECCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH YLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN HHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC >Mature Secondary Structure SVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDE CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCH RVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEPIA HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCHHH AAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNYFD HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH RAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTN HHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEC ASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETRE CHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCC FEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAH CCEECCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH YLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN HHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA