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The map label for this gene is 51597554

Identifier: 51597554

GI number: 51597554

Start: 3829049

End: 3830401

Strand: Reverse

Name: 51597554

Synonym: YPTB3250

Alternate gene names: NA

Gene position: 3830401-3829049 (Counterclockwise)

Preceding gene: 51597555

Following gene: 51597553

Centisome position: 80.73

GC content: 59.94

Gene sequence:

>1353_bases
ATGAAAATTGAACGCCCTCTGTGGGCTCGCGGGATCCTGGTGTCTCCGCAACAATTTCAACAACAGGCTTCCTGGGAGGC
CTGGACCAATGAATGCATTGCGCAAATGGCCGTGATGCATCCCTGGGGCGTGCTTCAGGCCACTTTTGAATTGGATGCAT
TGGCACAGGGCCGCCTGAAAGCGGCGCGTTTGCATGTGCGTTTTCAGGACGGTGTGCTGGTGGATACCGAGTGTGCTGAT
GTGCTGCCGCCCACGCTGACGCTGGCAGCCAGTCTGCCCGCCGAGGCCAGCGACGCCACGGTGATGCTGGCGATACCACA
ACTGTATGCCAATGGCGGTAACTGCCTGCAGCCGGATGAGCGGGGCGAACGCCCGGTACGCCATCGTCAGGCCTGGCGCG
ATGTCCAAAATCAGTTCGGCGATGACAAAAAGCAGGTCGCGGTGATGTACCACCAACTGACCCTGCGGCTGGACACTCAG
GAAAACGGCGATTATCAGGTCTGCCCGGTGGCGCGTTTGCTGCGGGATGCGCAAGGTCGCTGGACACTGGATCCGGGCTT
TATTCCGCCGATGCTGAGCCTGCAGGCCAGTGCCTGGTGTGGCGAACAGCTTGAGTTATTGATGGTGCAACTGCGGGCGC
GTTTGCAGCGTCTGATGGGGATGCGCCGGGAGAGCAATGCACGGATGGCCGATTTTGCTGTCGCGGATGTGTCGCTGTTC
TGGCTGCTCAATGCCCTTAACAGTGCCGAACCGGTATTGGGGAATTTTCAGCGCTATCCGCAGGTTCATCCAGAGCGCCT
GTATCAGGAACTGGCCAGGCTGGCGGGCAGCCTGCTGACGTTCTCCCTTGAACACGAAGTGACGGCGATCCCGGTTTATC
AGCATGAACAACTGACCCGCGTCTTTCCCCCGTTGTTTGCCCTGCTGAATATTCTGCTGGAAGCCAGCCTCCCATCACGG
GTGGTGGCGATTGAGCTGGTTCATGAACCGCGTATCAATCAGTGGCGCGCGACCCTGCGTGACCCTCGTCTGCGCGAAGG
GGCCGATTTCTACCTGTCGGTCCGTTCCTCGTTGCCCGCGGCCCAATTGCAGACTCAGTTCCCGCAGTTGTGTAAAGCCG
GTGCGCCAGATGAGGTCGGTAACGTGGTGAATGTCGCGTTGAGCGGGATCCCACTGCGTCCGCTGAGCCATGTCCCAGCC
GCCATCCCGTTGCGGCTGGAAAACCAGTACTTCTCCCTTGATCTCAGCCACCCTGCGGCGACGCAGATGATGGAGACGGG
GGCCTGTGTGTTCTATGTACCCGGTACGCTGGGTGAGATCCAACTGGAGCTGTTTGCGGTGCTACGCGCATGA

Upstream 100 bases:

>100_bases
TCAAGCTGTATGCGGTGCCGCATTTCCAGGTGGAAGGGATGGACGTCAATCTGTCATTGGTTTCCCAAATGCCAAAGGCT
AAGGCATAAACGGCGACACG

Downstream 100 bases:

>100_bases
ATCCTCACCTAACCGAACACCCCCCAGTCGGGGATATTGACGTCCTGTTGCAGGACACCTGGCTACAGGTGATCAGCCTG
CGTCAAGGGGTAACCTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Protein ImpJ/VasE; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6ss M; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion Protein VasE; Type VI Secretion System Protein ImpJ; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKIERPLWARGILVSPQQFQQQASWEAWTNECIAQMAVMHPWGVLQATFELDALAQGRLKAARLHVRFQDGVLVDTECAD
VLPPTLTLAASLPAEASDATVMLAIPQLYANGGNCLQPDERGERPVRHRQAWRDVQNQFGDDKKQVAVMYHQLTLRLDTQ
ENGDYQVCPVARLLRDAQGRWTLDPGFIPPMLSLQASAWCGEQLELLMVQLRARLQRLMGMRRESNARMADFAVADVSLF
WLLNALNSAEPVLGNFQRYPQVHPERLYQELARLAGSLLTFSLEHEVTAIPVYQHEQLTRVFPPLFALLNILLEASLPSR
VVAIELVHEPRINQWRATLRDPRLREGADFYLSVRSSLPAAQLQTQFPQLCKAGAPDEVGNVVNVALSGIPLRPLSHVPA
AIPLRLENQYFSLDLSHPAATQMMETGACVFYVPGTLGEIQLELFAVLRA

Sequences:

>Translated_450_residues
MKIERPLWARGILVSPQQFQQQASWEAWTNECIAQMAVMHPWGVLQATFELDALAQGRLKAARLHVRFQDGVLVDTECAD
VLPPTLTLAASLPAEASDATVMLAIPQLYANGGNCLQPDERGERPVRHRQAWRDVQNQFGDDKKQVAVMYHQLTLRLDTQ
ENGDYQVCPVARLLRDAQGRWTLDPGFIPPMLSLQASAWCGEQLELLMVQLRARLQRLMGMRRESNARMADFAVADVSLF
WLLNALNSAEPVLGNFQRYPQVHPERLYQELARLAGSLLTFSLEHEVTAIPVYQHEQLTRVFPPLFALLNILLEASLPSR
VVAIELVHEPRINQWRATLRDPRLREGADFYLSVRSSLPAAQLQTQFPQLCKAGAPDEVGNVVNVALSGIPLRPLSHVPA
AIPLRLENQYFSLDLSHPAATQMMETGACVFYVPGTLGEIQLELFAVLRA
>Mature_450_residues
MKIERPLWARGILVSPQQFQQQASWEAWTNECIAQMAVMHPWGVLQATFELDALAQGRLKAARLHVRFQDGVLVDTECAD
VLPPTLTLAASLPAEASDATVMLAIPQLYANGGNCLQPDERGERPVRHRQAWRDVQNQFGDDKKQVAVMYHQLTLRLDTQ
ENGDYQVCPVARLLRDAQGRWTLDPGFIPPMLSLQASAWCGEQLELLMVQLRARLQRLMGMRRESNARMADFAVADVSLF
WLLNALNSAEPVLGNFQRYPQVHPERLYQELARLAGSLLTFSLEHEVTAIPVYQHEQLTRVFPPLFALLNILLEASLPSR
VVAIELVHEPRINQWRATLRDPRLREGADFYLSVRSSLPAAQLQTQFPQLCKAGAPDEVGNVVNVALSGIPLRPLSHVPA
AIPLRLENQYFSLDLSHPAATQMMETGACVFYVPGTLGEIQLELFAVLRA

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50455; Mature: 50455

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIERPLWARGILVSPQQFQQQASWEAWTNECIAQMAVMHPWGVLQATFELDALAQGRLK
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE
AARLHVRFQDGVLVDTECADVLPPTLTLAASLPAEASDATVMLAIPQLYANGGNCLQPDE
EEEEEEEEECCEEEECCHHHHCCCHHEEHCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCC
RGERPVRHRQAWRDVQNQFGDDKKQVAVMYHQLTLRLDTQENGDYQVCPVARLLRDAQGR
CCCCCHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEECCCCCCEEEEHHHHHHHCCCCC
WTLDPGFIPPMLSLQASAWCGEQLELLMVQLRARLQRLMGMRRESNARMADFAVADVSLF
EEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
WLLNALNSAEPVLGNFQRYPQVHPERLYQELARLAGSLLTFSLEHEVTAIPVYQHEQLTR
HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEECHHHHHHHH
VFPPLFALLNILLEASLPSRVVAIELVHEPRINQWRATLRDPRLREGADFYLSVRSSLPA
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCH
AQLQTQFPQLCKAGAPDEVGNVVNVALSGIPLRPLSHVPAAIPLRLENQYFSLDLSHPAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHH
TQMMETGACVFYVPGTLGEIQLELFAVLRA
HHHHHCCCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKIERPLWARGILVSPQQFQQQASWEAWTNECIAQMAVMHPWGVLQATFELDALAQGRLK
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE
AARLHVRFQDGVLVDTECADVLPPTLTLAASLPAEASDATVMLAIPQLYANGGNCLQPDE
EEEEEEEEECCEEEECCHHHHCCCHHEEHCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCC
RGERPVRHRQAWRDVQNQFGDDKKQVAVMYHQLTLRLDTQENGDYQVCPVARLLRDAQGR
CCCCCHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEECCCCCCEEEEHHHHHHHCCCCC
WTLDPGFIPPMLSLQASAWCGEQLELLMVQLRARLQRLMGMRRESNARMADFAVADVSLF
EEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
WLLNALNSAEPVLGNFQRYPQVHPERLYQELARLAGSLLTFSLEHEVTAIPVYQHEQLTR
HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEECHHHHHHHH
VFPPLFALLNILLEASLPSRVVAIELVHEPRINQWRATLRDPRLREGADFYLSVRSSLPA
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCH
AQLQTQFPQLCKAGAPDEVGNVVNVALSGIPLRPLSHVPAAIPLRLENQYFSLDLSHPAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHH
TQMMETGACVFYVPGTLGEIQLELFAVLRA
HHHHHCCCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA