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The map label for this gene is pspA

Identifier: 51596594

GI number: 51596594

Start: 2679240

End: 2679905

Strand: Reverse

Name: pspA

Synonym: YPTB2270

Alternate gene names: 51596594

Gene position: 2679905-2679240 (Counterclockwise)

Preceding gene: 51596606

Following gene: 51596593

Centisome position: 56.48

GC content: 48.05

Gene sequence:

>666_bases
ATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAACGCGAACATCAATACATTACTGGATAAAGCTGAAGATCCACAGAA
ATTAGTGCGTCTTATGATTCAGGAAATGGAAGATACGCTGGTGGAAATCCGCTCAACATCAGCCCGTGCACTGGCAGAGA
AAAAGCAACTGCTACGCCGTATTGACCACAGCGAAAGTCAGCAACAGGAGTGGCAGGAAAAAGCTGAGCTGGCCTTGCGT
AAAGATAAAGAAGACTTGGCGCGTGCTGCACTGCTTGAAAAACAGAAAGTCATGACGTTAGTTGAGACGCTAAAACGTGA
AGTGGCAACCGTGGACGAAACCCTGAGCCGCATGAAGCATGAAATTACGGAGTTGGAAAATAAACTGACCGAGACCCGAG
CCAGACAACAGGCATTGACCTTGCGCCATCAGGCTGCATCGTCATCTCGTGATGTACGCCGCCAATTGGACAGCGGTAAG
CTTGATGAAGCGATGGCGCGCTTTGAGCAGTTTGAACGCCGTATTGACCATATGGAAGCTGAAGCGGAAACCGTTGGGGT
TGGCAAACAGAAGTCTTTGGACCAACAGTTTGCCGAGTTGAGAGCGGATGATGAAATCAGTAGCCAATTAGCGGCATTAA
AAGCGAAAATGAAATCAGTTGAATAG

Upstream 100 bases:

>100_bases
GAATGGCAGCATCGTGAATAACGGATCTTGCCCATCAAGCTAACGGCGCAATCAGACGCCACTATTTCAGAGAACCAATA
AGTCAAAGGGGACGTAAATT

Downstream 100 bases:

>100_bases
TTAATTTTCCGTATTTATTAGCAAACAAGGTACTTAATGTCATTGGAGCATCGCGATAGCTTCGAGTTCAAAGGGTATAT
ACGGAACCGGCAGTGCCTCA

Product: phage shock protein PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MGIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARALAEKKQLLRRIDHSESQQQEWQEKAELALR
KDKEDLARAALLEKQKVMTLVETLKREVATVDETLSRMKHEITELENKLTETRARQQALTLRHQAASSSRDVRRQLDSGK
LDEAMARFEQFERRIDHMEAEAETVGVGKQKSLDQQFAELRADDEISSQLAALKAKMKSVE

Sequences:

>Translated_221_residues
MGIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARALAEKKQLLRRIDHSESQQQEWQEKAELALR
KDKEDLARAALLEKQKVMTLVETLKREVATVDETLSRMKHEITELENKLTETRARQQALTLRHQAASSSRDVRRQLDSGK
LDEAMARFEQFERRIDHMEAEAETVGVGKQKSLDQQFAELRADDEISSQLAALKAKMKSVE
>Mature_220_residues
GIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARALAEKKQLLRRIDHSESQQQEWQEKAELALRK
DKEDLARAALLEKQKVMTLVETLKREVATVDETLSRMKHEITELENKLTETRARQQALTLRHQAASSSRDVRRQLDSGKL
DEAMARFEQFERRIDHMEAEAETVGVGKQKSLDQQFAELRADDEISSQLAALKAKMKSVE

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspA negatively regulates expression of the pspABCDE promoter and of pspG through negative regulation

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=218, Percent_Identity=79.8165137614679, Blast_Score=340, Evalue=7e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014319
- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25402; Mature: 25271

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARALAEKKQLLRR
CCHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDHSESQQQEWQEKAELALRKDKEDLARAALLEKQKVMTLVETLKREVATVDETLSRMKH
HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EITELENKLTETRARQQALTLRHQAASSSRDVRRQLDSGKLDEAMARFEQFERRIDHMEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
EAETVGVGKQKSLDQQFAELRADDEISSQLAALKAKMKSVE
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARALAEKKQLLRR
CHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDHSESQQQEWQEKAELALRKDKEDLARAALLEKQKVMTLVETLKREVATVDETLSRMKH
HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EITELENKLTETRARQQALTLRHQAASSSRDVRRQLDSGKLDEAMARFEQFERRIDHMEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
EAETVGVGKQKSLDQQFAELRADDEISSQLAALKAKMKSVE
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]