| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596524
Identifier: 51596524
GI number: 51596524
Start: 2588957
End: 2590555
Strand: Reverse
Name: 51596524
Synonym: YPTB2198
Alternate gene names: NA
Gene position: 2590555-2588957 (Counterclockwise)
Preceding gene: 51596526
Following gene: 51596522
Centisome position: 54.6
GC content: 55.66
Gene sequence:
>1599_bases ATGAAAGTTTCAAATTACAGCCCATGGTATAGAAGTGACTTGAATCTCTCCACAATAAGGTTACCCATGTTTGTATCTAG ATCAGACAGTACTCTAAACGCTATTTTCGGCATGAATGAGCAAGGTAAGCCGGAAGCAACATCCAAGAGTGACCCACAAG GAGTAACCTTGTCCGACGCTCAGAAACTGGCAGTTAATAACAGCAAGTTCTTCGAGGCAGGTGCCAGCATGTCGCTTCTA GACCAGCCAGGCAAAATGGGCCATGTATTCGACCAGTACGCAAAACAATTAGCGGGACTGTTGCGTCACATACTGGACGG ACAGAGTGAAGCCGCCAACCATACCGTTCACTTTCAGGGCCGGCAACAAACACTGGGTGCGGTACTTCAGGCAGCAATCA AACCGCTGTCGAGGGAGTCCGACCAGATAGGCCGGCAGATGGACAGTATCCAGGATTTTCAGCCCTGGATATTGGACACC CTGAACACACCGTTGCAAGGCCTCGCCGATGGTTCCCTCAAGCAAGGGTACCCAGAACTGTTGACCAAGATTCGCACCTT GAGCGCGTTCGGTACCACGGTGTGGCAGTTGATAAACCCGGTAGAAAACCAGGCCAAGCCGGAACTGTACTCTCAGCATA AACAAGCCAATGCCGACGCTTGCGCTGCGCTACTACGCGAAGTCGGTCTGTCCTCGCAGGCGGACGATTTCGACGCTCGC TTCAAGGAATTCTCCGGCAAAACCCGCACACCAGGTTTCGACAATCCATTGAGTCGCGCACGCAGCGAGCGCATGCCTAT GGTGACGACCGACGAAGACGGCGCGCGCGCGGTGAACGGGATATACGAGGACGCAGCCAAATATGGACTAGGCTTTGGTC AGGTGGTACAGCGCACTGTCGGCGGCGCGGACGATGCGGCTTTGCGTCAGGCCTTGGGCGACCGAAACCAAAACATTAAC GCGATAGCGCGTTCAGGTGCGCCGATCGCCGATCTGAGCCGCCCGTTCACCATGTCCGAGGAGGATATGGGGGCGGTTCC GGAGGCCTATGCTCAGCTTGGCATGGCTCAGATGCTGGAGCAGCACTCGATGACGCACGGCACCGGTATCAACCGCTGGC AGCCGTTTGGTACGTTTGCGTTAGAAAGCAATCAGCAGGGCCTTCCTTCCGCCGGCGCGCAATCTGGCGGCACCTGCGAT ATCTTACTGGCACTCAACACCCTGGGCGGAGAACGGATTTACGGCAACCCTGACCTGGCTCTGCCCGCGGGCTTGGGGAT AGCTGCTTTCATGAACTTCGGCGGCTATCACACCTTTGCTGAGACTTTCCCTATCGCTGAGGCCGCTGCCGCCAACCGTC CTTATGTGCCCACTAATCTGGCAGGGGTTAACCAACCGGATCTATTCGAGCGGATACATGCATCCGCAGAAAAGTATTGC CCGGAAGGCAGAGAGCAGGTGGGGAGTTACCTGAATGCACACAAAGAAACACTGGTTGCGCTACAGGCGCAACACCCCGA CCTTGACCTGAGCCCCCGAGTGCATGATGTCGAGTTCCACGGTTCCCCTGAGATGATAGAAAAGTGGCGTCTAATGTGA
Upstream 100 bases:
>100_bases AGCCCAACCGTACGAAAACGTACTATTCCCATTTTGGAATCACCCTAAATTCCAGTCAGCAGCCCTGCTGCATTAACACT TTTAATACAATAGTTATTTT
Downstream 100 bases:
>100_bases GCCAGCGGTTCTGGACTGAATGTCTGCCAGATGGATTGTAAGTCCAGTGGCAGTAATTTTGAGCCGCTAAAACTACTGAA CGGTGTGAGTGACTAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MKVSNYSPWYRSDLNLSTIRLPMFVSRSDSTLNAIFGMNEQGKPEATSKSDPQGVTLSDAQKLAVNNSKFFEAGASMSLL DQPGKMGHVFDQYAKQLAGLLRHILDGQSEAANHTVHFQGRQQTLGAVLQAAIKPLSRESDQIGRQMDSIQDFQPWILDT LNTPLQGLADGSLKQGYPELLTKIRTLSAFGTTVWQLINPVENQAKPELYSQHKQANADACAALLREVGLSSQADDFDAR FKEFSGKTRTPGFDNPLSRARSERMPMVTTDEDGARAVNGIYEDAAKYGLGFGQVVQRTVGGADDAALRQALGDRNQNIN AIARSGAPIADLSRPFTMSEEDMGAVPEAYAQLGMAQMLEQHSMTHGTGINRWQPFGTFALESNQQGLPSAGAQSGGTCD ILLALNTLGGERIYGNPDLALPAGLGIAAFMNFGGYHTFAETFPIAEAAAANRPYVPTNLAGVNQPDLFERIHASAEKYC PEGREQVGSYLNAHKETLVALQAQHPDLDLSPRVHDVEFHGSPEMIEKWRLM
Sequences:
>Translated_532_residues MKVSNYSPWYRSDLNLSTIRLPMFVSRSDSTLNAIFGMNEQGKPEATSKSDPQGVTLSDAQKLAVNNSKFFEAGASMSLL DQPGKMGHVFDQYAKQLAGLLRHILDGQSEAANHTVHFQGRQQTLGAVLQAAIKPLSRESDQIGRQMDSIQDFQPWILDT LNTPLQGLADGSLKQGYPELLTKIRTLSAFGTTVWQLINPVENQAKPELYSQHKQANADACAALLREVGLSSQADDFDAR FKEFSGKTRTPGFDNPLSRARSERMPMVTTDEDGARAVNGIYEDAAKYGLGFGQVVQRTVGGADDAALRQALGDRNQNIN AIARSGAPIADLSRPFTMSEEDMGAVPEAYAQLGMAQMLEQHSMTHGTGINRWQPFGTFALESNQQGLPSAGAQSGGTCD ILLALNTLGGERIYGNPDLALPAGLGIAAFMNFGGYHTFAETFPIAEAAAANRPYVPTNLAGVNQPDLFERIHASAEKYC PEGREQVGSYLNAHKETLVALQAQHPDLDLSPRVHDVEFHGSPEMIEKWRLM >Mature_532_residues MKVSNYSPWYRSDLNLSTIRLPMFVSRSDSTLNAIFGMNEQGKPEATSKSDPQGVTLSDAQKLAVNNSKFFEAGASMSLL DQPGKMGHVFDQYAKQLAGLLRHILDGQSEAANHTVHFQGRQQTLGAVLQAAIKPLSRESDQIGRQMDSIQDFQPWILDT LNTPLQGLADGSLKQGYPELLTKIRTLSAFGTTVWQLINPVENQAKPELYSQHKQANADACAALLREVGLSSQADDFDAR FKEFSGKTRTPGFDNPLSRARSERMPMVTTDEDGARAVNGIYEDAAKYGLGFGQVVQRTVGGADDAALRQALGDRNQNIN AIARSGAPIADLSRPFTMSEEDMGAVPEAYAQLGMAQMLEQHSMTHGTGINRWQPFGTFALESNQQGLPSAGAQSGGTCD ILLALNTLGGERIYGNPDLALPAGLGIAAFMNFGGYHTFAETFPIAEAAAANRPYVPTNLAGVNQPDLFERIHASAEKYC PEGREQVGSYLNAHKETLVALQAQHPDLDLSPRVHDVEFHGSPEMIEKWRLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57886; Mature: 57886
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSNYSPWYRSDLNLSTIRLPMFVSRSDSTLNAIFGMNEQGKPEATSKSDPQGVTLSDA CCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHCH QKLAVNNSKFFEAGASMSLLDQPGKMGHVFDQYAKQLAGLLRHILDGQSEAANHTVHFQG HHHHCCCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECC RQQTLGAVLQAAIKPLSRESDQIGRQMDSIQDFQPWILDTLNTPLQGLADGSLKQGYPEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCHHHH LTKIRTLSAFGTTVWQLINPVENQAKPELYSQHKQANADACAALLREVGLSSQADDFDAR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHH FKEFSGKTRTPGFDNPLSRARSERMPMVTTDEDGARAVNGIYEDAAKYGLGFGQVVQRTV HHHHCCCCCCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH GGADDAALRQALGDRNQNINAIARSGAPIADLSRPFTMSEEDMGAVPEAYAQLGMAQMLE CCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHH QHSMTHGTGINRWQPFGTFALESNQQGLPSAGAQSGGTCDILLALNTLGGERIYGNPDLA HHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCC LPAGLGIAAFMNFGGYHTFAETFPIAEAAAANRPYVPTNLAGVNQPDLFERIHASAEKYC CCCCHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC PEGREQVGSYLNAHKETLVALQAQHPDLDLSPRVHDVEFHGSPEMIEKWRLM CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCHHHHHHHCCC >Mature Secondary Structure MKVSNYSPWYRSDLNLSTIRLPMFVSRSDSTLNAIFGMNEQGKPEATSKSDPQGVTLSDA CCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHCH QKLAVNNSKFFEAGASMSLLDQPGKMGHVFDQYAKQLAGLLRHILDGQSEAANHTVHFQG HHHHCCCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECC RQQTLGAVLQAAIKPLSRESDQIGRQMDSIQDFQPWILDTLNTPLQGLADGSLKQGYPEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCHHHH LTKIRTLSAFGTTVWQLINPVENQAKPELYSQHKQANADACAALLREVGLSSQADDFDAR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHH FKEFSGKTRTPGFDNPLSRARSERMPMVTTDEDGARAVNGIYEDAAKYGLGFGQVVQRTV HHHHCCCCCCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH GGADDAALRQALGDRNQNINAIARSGAPIADLSRPFTMSEEDMGAVPEAYAQLGMAQMLE CCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHH QHSMTHGTGINRWQPFGTFALESNQQGLPSAGAQSGGTCDILLALNTLGGERIYGNPDLA HHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCC LPAGLGIAAFMNFGGYHTFAETFPIAEAAAANRPYVPTNLAGVNQPDLFERIHASAEKYC CCCCHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC PEGREQVGSYLNAHKETLVALQAQHPDLDLSPRVHDVEFHGSPEMIEKWRLM CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA