| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is mviN
Identifier: 51596352
GI number: 51596352
Start: 2383495
End: 2385030
Strand: Direct
Name: mviN
Synonym: YPTB2026
Alternate gene names: 51596352
Gene position: 2383495-2385030 (Clockwise)
Preceding gene: 51596351
Following gene: 51596353
Centisome position: 50.24
GC content: 51.17
Gene sequence:
>1536_bases ATGAATCTATTGAAATCACTGGCCGCCGTCAGTTCCATGACGATGTTTTCCCGCGTGCTGGGCTTTGCCCGCGATGCCAT CGTGGCACGGGTATTTGGTGCAGGTATGGCGACGGACGCCTTTTTTGTGGCATTTAAATTGCCTAACTTGCTGCGGCGAA TATTTGCTGAAGGCGCATTTTCCCAAGCTTTTGTGCCTATTCTGGCTGAATACAAAAGCCAGCAAGGGGAAGAGGCGACG CGAACATTAGTGGCTTATGTCTCTGGCCTGTTAACCTTGATATTGGCGGTCGTCACCGTCGCGGGGATGCTGGCCGCGCC TTGGGTGATCTTCATTTCCGCCCCCGGCTTTACTGATACACCGGATAAATTTGCTCTGACCTCGGCGCTGTTACGGGTGA CTTTCCCGTATATTTTGCTGATCTCATTGGCCTCGCTAGTCGGAGCGATCCTTAATACCTGGAACCGTTTTTCTATTCCG GCTTTTGCGCCAACCCTCCTCAATGTCAGCATGATAGGTTTTGCGCTGTTTGCTGCGCCTCATTTCAACCCGCCGGTGAT GGCATTGGCTTGGGCTGTGGTGGTGGGGGGAGTGTTACAATTAGGCTATCAACTCCCGCACCTAAAAAAAATCGGCATGT TGGTATTACCTCGGCTGTCGCTACGTGATACCGGTGTTTGGCGGGTGATGCGCCAGATGGGGCCAGCGATCCTCGGGGTA TCAGTCAGTCAGATTTCCCTGATTATCAATACGATTTTTGCATCATTTTTGGTATCTGGTTCGGTCTCCTGGATGTACTA CGCTGACCGTCTGATGGAGTTCCCCTCCGGGGTGTTAGGGGGCGCGTTAGGTACTATCCTGCTGCCATCACTGGCAAAGA GTTTTTCCAGTGCTAATCATGATGAATATTCCAGATTGATGGATTGGGGGCTGCGTCTTTGCTTCTTACTGGCCTTGCCA AGCGCGGTGGCATTAGGAATTTTAGCTAAACCGCTAATCGTCTCGTTATTCCAATACGGGAAATTTAGCGCGTTTGACAC CCTGATGACACAACGGGCGCTGGTGGCCTATTCGGTGGGCTTGATGGGGTTGATCGTGGTGAAGGTTCTGGCTCCGGGGT TTTATTCTCGTCAGAATATTAAAACGCCGGTAAAAATCGCGATTATTACCTTGATACTCACGCAAGTCATGAACTTGATC TTCATTGGGCCGTTTAAACACGCGGGCTTATCACTGTCTATCGGCCTGGGGGCATGTCTGAATGCCAGTTTGCTCTATTG GCAGCTACGTAAACAGAAAATTTTCCAGCCACAGCCGGGGTGGGCCATATTCCTGACTAAATTGGTCATCGGTGTTATCG CGATGTCTGCGGTGCTGCTAGGGTTACTGTGGGTCATGCCTGATTGGGATGTTGGCGGGATGGCGTATCGGTTGCTACGG TTATCTGCGGTTGTTGTTGCCGGTGCTAGCGCCTACTTTGCCATGTTGGCATTATTAGGCTTTAAAGTGCGTGATTTTGC CCGTAGAACGGGCTGA
Upstream 100 bases:
>100_bases GCCGTGTTGATAACGGCGAATCCCCCATTGGGTAGAGCAACGCCTGCAGACCGTAGGCGTTGGTATTTACAGCACATTAG AAAACAGATCAAAAGAACCT
Downstream 100 bases:
>100_bases CCTTACTAATCAACTAATCAACTAATCAACTAATCAATCAGTATTGGTAATCTAAATAAACAATGTATTATATAGCCCGA TAATTTCGGGCTTTTTTACA
Product: virulence factor mviN, MOP superfamliy efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MNLLKSLAAVSSMTMFSRVLGFARDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSQQGEEAT RTLVAYVSGLLTLILAVVTVAGMLAAPWVIFISAPGFTDTPDKFALTSALLRVTFPYILLISLASLVGAILNTWNRFSIP AFAPTLLNVSMIGFALFAAPHFNPPVMALAWAVVVGGVLQLGYQLPHLKKIGMLVLPRLSLRDTGVWRVMRQMGPAILGV SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGGALGTILLPSLAKSFSSANHDEYSRLMDWGLRLCFLLALP SAVALGILAKPLIVSLFQYGKFSAFDTLMTQRALVAYSVGLMGLIVVKVLAPGFYSRQNIKTPVKIAIITLILTQVMNLI FIGPFKHAGLSLSIGLGACLNASLLYWQLRKQKIFQPQPGWAIFLTKLVIGVIAMSAVLLGLLWVMPDWDVGGMAYRLLR LSAVVVAGASAYFAMLALLGFKVRDFARRTG
Sequences:
>Translated_511_residues MNLLKSLAAVSSMTMFSRVLGFARDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSQQGEEAT RTLVAYVSGLLTLILAVVTVAGMLAAPWVIFISAPGFTDTPDKFALTSALLRVTFPYILLISLASLVGAILNTWNRFSIP AFAPTLLNVSMIGFALFAAPHFNPPVMALAWAVVVGGVLQLGYQLPHLKKIGMLVLPRLSLRDTGVWRVMRQMGPAILGV SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGGALGTILLPSLAKSFSSANHDEYSRLMDWGLRLCFLLALP SAVALGILAKPLIVSLFQYGKFSAFDTLMTQRALVAYSVGLMGLIVVKVLAPGFYSRQNIKTPVKIAIITLILTQVMNLI FIGPFKHAGLSLSIGLGACLNASLLYWQLRKQKIFQPQPGWAIFLTKLVIGVIAMSAVLLGLLWVMPDWDVGGMAYRLLR LSAVVVAGASAYFAMLALLGFKVRDFARRTG >Mature_511_residues MNLLKSLAAVSSMTMFSRVLGFARDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSQQGEEAT RTLVAYVSGLLTLILAVVTVAGMLAAPWVIFISAPGFTDTPDKFALTSALLRVTFPYILLISLASLVGAILNTWNRFSIP AFAPTLLNVSMIGFALFAAPHFNPPVMALAWAVVVGGVLQLGYQLPHLKKIGMLVLPRLSLRDTGVWRVMRQMGPAILGV SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGGALGTILLPSLAKSFSSANHDEYSRLMDWGLRLCFLLALP SAVALGILAKPLIVSLFQYGKFSAFDTLMTQRALVAYSVGLMGLIVVKVLAPGFYSRQNIKTPVKIAIITLILTQVMNLI FIGPFKHAGLSLSIGLGACLNASLLYWQLRKQKIFQPQPGWAIFLTKLVIGVIAMSAVLLGLLWVMPDWDVGGMAYRLLR LSAVVVAGASAYFAMLALLGFKVRDFARRTG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=510, Percent_Identity=85.2941176470588, Blast_Score=864, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55318; Mature: 55318
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKSLAAVSSMTMFSRVLGFARDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPILAEYKSQQGEEATRTLVAYVSGLLTLILAVVTVAGMLAAPWVIFISAPGFTDT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC PDKFALTSALLRVTFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNVSMIGFALFAAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC HFNPPVMALAWAVVVGGVLQLGYQLPHLKKIGMLVLPRLSLRDTGVWRVMRQMGPAILGV CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHCCHHCCC SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGGALGTILLPSLAKSFSSANH HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH DEYSRLMDWGLRLCFLLALPSAVALGILAKPLIVSLFQYGKFSAFDTLMTQRALVAYSVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LMGLIVVKVLAPGFYSRQNIKTPVKIAIITLILTQVMNLIFIGPFKHAGLSLSIGLGACL HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECHHHHH NASLLYWQLRKQKIFQPQPGWAIFLTKLVIGVIAMSAVLLGLLWVMPDWDVGGMAYRLLR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LSAVVVAGASAYFAMLALLGFKVRDFARRTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLLKSLAAVSSMTMFSRVLGFARDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPILAEYKSQQGEEATRTLVAYVSGLLTLILAVVTVAGMLAAPWVIFISAPGFTDT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC PDKFALTSALLRVTFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNVSMIGFALFAAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC HFNPPVMALAWAVVVGGVLQLGYQLPHLKKIGMLVLPRLSLRDTGVWRVMRQMGPAILGV CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHCCHHCCC SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGGALGTILLPSLAKSFSSANH HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH DEYSRLMDWGLRLCFLLALPSAVALGILAKPLIVSLFQYGKFSAFDTLMTQRALVAYSVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LMGLIVVKVLAPGFYSRQNIKTPVKIAIITLILTQVMNLIFIGPFKHAGLSLSIGLGACL HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECHHHHH NASLLYWQLRKQKIFQPQPGWAIFLTKLVIGVIAMSAVLLGLLWVMPDWDVGGMAYRLLR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LSAVVVAGASAYFAMLALLGFKVRDFARRTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]