| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is fabH [H]
Identifier: 51596297
GI number: 51596297
Start: 2323411
End: 2324418
Strand: Direct
Name: fabH [H]
Synonym: YPTB1971
Alternate gene names: 51596297
Gene position: 2323411-2324418 (Clockwise)
Preceding gene: 51596295
Following gene: 51596298
Centisome position: 48.97
GC content: 51.29
Gene sequence:
>1008_bases ATGTCGACATTATTAATTTCAGCACCTCATCTGGCGTTCAAAATTATCGCCACAGGGGTATCGTTACCCCCTGATAGGGT GGAATCCTCGACGTTGGATCGTAAACTCAATAAGCCTGTCGGTTATGTAGAACAACGTTCTGGTGTCCGGCATCGTTATC ATGCGACGGCAGATGCTAACCAAGCTGAGTTAGCGGCGGCAGCACTGCATGATGCCCTTGAGCGCCATGGGATCAATCCT TCCTCAATCGATTTATTAATATCAGCCTCGGCTATTGCCTACCAGGCCCTACCGTGCACGGCGGTGCATATTCTCAAAAT AGCGGGTCTGGCACCTCGCATTGCTGGGTTTGATATCAATAGCAGTTGCGTGAGCTTTATTTCCGCATTACAGGTGGCTG CGGGGCTACTGAATGCCGGAACTTATCAGCGTATCGCTATTGTTTCAGCCGATCTGGCATCACGAGGTATTGACTGGAAT GATGAGGAGTCTTCGCTGATCTTCGGTGATGGTGCCGCATGTGCCATTGTGGAACGAGGAGATGGCCGCAGTGGCATATT AGCCAGTCTGGTTGAAATGTATCCTACGGGCAGTGAGTTATGTGAGATTCGGGCGGGGGGCACACGATGCAACCCTCGCT CAGGTATGGATAACGACGATTTCTTATTTCATATGCAGGGCAAGAGGCTGTTCCGACAAGCCTCTGGTATCATTGAAGAT TATTTCCAGCGTCTATTGGAAAAAAGTGGGCTGACATTAGCGGATATTGCCACGGTAATTCCGCATCAGGCGAGCCATTT ATCGCTGGCGCATATGCGCAAACGCTTACATGTGCCAACAGATGTGCTGGTGGATATCTATCGAGATCATGGTAACCAGG TGGCGGCATCGATACCAACCGCATTGCATGCCGCCGTGATGAGCGGGCGCTTTTCGCCGGGTAAACCGGTGATGCTTATT GGTACCGCAGCAGGGTTGACGCTGGCGGGGATGGTTTTGCTGCCATGA
Upstream 100 bases:
>100_bases TTTTCGTTCCCCAATAATTAGGGGCCGCCAAAGGGAGATTTCTCCCCAGCCACATACTGGCAATTCACGTTTCAAGCGCT AAAAAGGTATCTATCTTTCC
Downstream 100 bases:
>100_bases GAGCCTTACGATCATGAAAGTCTTAGTGACAGGGGCAACCAGTGGATTGGGGCGCAACGCAGCACAATGGCTGTTGGAGG CAGGGCACGAGGTCTATGCT
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSTLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINP SSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWN DEESSLIFGDGAACAIVERGDGRSGILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPTALHAAVMSGRFSPGKPVMLI GTAAGLTLAGMVLLP
Sequences:
>Translated_335_residues MSTLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINP SSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWN DEESSLIFGDGAACAIVERGDGRSGILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPTALHAAVMSGRFSPGKPVMLI GTAAGLTLAGMVLLP >Mature_334_residues STLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINPS SIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWND EESSLIFGDGAACAIVERGDGRSGILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIEDY FQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPTALHAAVMSGRFSPGKPVMLIG TAAGLTLAGMVLLP
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=314, Percent_Identity=28.0254777070064, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 35631; Mature: 35500
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADAN CCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCC QAELAAAALHDALERHGINPSSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDIN HHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCC SSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWNDEESSLIFGDGAACAIVERG HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCEEEECCCEEEEEECC DGRSGILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED CCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPT HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHH ALHAAVMSGRFSPGKPVMLIGTAAGLTLAGMVLLP HHHHHHHHCCCCCCCCEEEEEEHHHHHHHCEEECC >Mature Secondary Structure STLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADAN CCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCC QAELAAAALHDALERHGINPSSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDIN HHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCC SSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWNDEESSLIFGDGAACAIVERG HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCEEEECCCEEEEEECC DGRSGILASLVEMYPTGSELCEIRAGGTRCNPRSGMDNDDFLFHMQGKRLFRQASGIIED CCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH YFQRLLEKSGLTLADIATVIPHQASHLSLAHMRKRLHVPTDVLVDIYRDHGNQVAASIPT HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHH ALHAAVMSGRFSPGKPVMLIGTAAGLTLAGMVLLP HHHHHHHHCCCCCCCCEEEEEEHHHHHHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA