| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ves [H]
Identifier: 51596295
GI number: 51596295
Start: 2320027
End: 2320599
Strand: Direct
Name: ves [H]
Synonym: YPTB1969
Alternate gene names: 51596295
Gene position: 2320027-2320599 (Clockwise)
Preceding gene: 51596294
Following gene: 51596297
Centisome position: 48.9
GC content: 51.48
Gene sequence:
>573_bases ATGAGTTTTACCGTTTTTGATTTTGCCGGTCTGCCCGTCAGCCGCTGGCGAAATGGTGGCGGCGAAACCCGTGAAATTGC GTGTTGGCCTGTCGGCGGTGATGACTTTGCATGGCGTGCCAGTATCGCAACGATTGAGCAGGATGGTCCATTCTCATTTT ACCCTGATATTGACCGTTCCATCACCTTACTTACCGGTGATGGCATCGTCTTATCTAGCCCAGGGTTAGGGGTACATAAA CTCTCAAATCCTTTACAGACGTTTGCTTTCCCTGGAGATGTTCCCGTTAATGGCCGGTTATTGGGGGGGAGCAGCCAGGA TTTCAATATTATGACGCGTCGTGGCTGCTGGCAGGCCACGGTAAGTTCCGTAAGTTCAGGTCAGCAATTACCCGCCTCCT ACGGAGGATTGATTTATATCGTCAAAGGCGAGTGGCTTATCTGCCATACAGAAACACATCAGTTGAAGGCTCAACAGGGT TGCTGGTGGCTACCAACGATAAAAGCAGGGCAATTACAACCGCTTGCCGCCGATAGCCACTTGCTGTGGGTAACGTTAGT GCCTGGCCGCTAG
Upstream 100 bases:
>100_bases TGGCAGGCAAGGCGGTAATCGTGGATAGATATCATCCATTGCAACAGCAAACTGCGCAAGCTTTTCTGGCTGTACTGAAA GCCTGCCAACAGGAGGTCTG
Downstream 100 bases:
>100_bases AGTAGTCATTATCACAATCGCTATGGCAATCTGGCATTTGTAGTCAGTCATGTTTTTACGATAAATCATGCTGTTATAGT TAACCTTATGTTCACAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSFTVFDFAGLPVSRWRNGGGETREIACWPVGGDDFAWRASIATIEQDGPFSFYPDIDRSITLLTGDGIVLSSPGLGVHK LSNPLQTFAFPGDVPVNGRLLGGSSQDFNIMTRRGCWQATVSSVSSGQQLPASYGGLIYIVKGEWLICHTETHQLKAQQG CWWLPTIKAGQLQPLAADSHLLWVTLVPGR
Sequences:
>Translated_190_residues MSFTVFDFAGLPVSRWRNGGGETREIACWPVGGDDFAWRASIATIEQDGPFSFYPDIDRSITLLTGDGIVLSSPGLGVHK LSNPLQTFAFPGDVPVNGRLLGGSSQDFNIMTRRGCWQATVSSVSSGQQLPASYGGLIYIVKGEWLICHTETHQLKAQQG CWWLPTIKAGQLQPLAADSHLLWVTLVPGR >Mature_189_residues SFTVFDFAGLPVSRWRNGGGETREIACWPVGGDDFAWRASIATIEQDGPFSFYPDIDRSITLLTGDGIVLSSPGLGVHKL SNPLQTFAFPGDVPVNGRLLGGSSQDFNIMTRRGCWQATVSSVSSGQQLPASYGGLIYIVKGEWLICHTETHQLKAQQGC WWLPTIKAGQLQPLAADSHLLWVTLVPGR
Specific function: Unknown
COG id: COG3758
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ves family [H]
Homologues:
Organism=Escherichia coli, GI87081963, Length=171, Percent_Identity=39.1812865497076, Blast_Score=111, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR010282 [H]
Pfam domain/function: PF05962 HutD [H]
EC number: NA
Molecular weight: Translated: 20648; Mature: 20516
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTVFDFAGLPVSRWRNGGGETREIACWPVGGDDFAWRASIATIEQDGPFSFYPDIDRS CCEEEEEECCCCHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEECCCCCCE ITLLTGDGIVLSSPGLGVHKLSNPLQTFAFPGDVPVNGRLLGGSSQDFNIMTRRGCWQAT EEEEECCCEEEECCCCCHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCEEEEECCCHHHH VSSVSSGQQLPASYGGLIYIVKGEWLICHTETHQLKAQQGCWWLPTIKAGQLQPLAADSH HHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCEEHHCCCCEECCCCCCCCCCEEECCCE LLWVTLVPGR EEEEEEECCC >Mature Secondary Structure SFTVFDFAGLPVSRWRNGGGETREIACWPVGGDDFAWRASIATIEQDGPFSFYPDIDRS CEEEEEECCCCHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEECCCCCCE ITLLTGDGIVLSSPGLGVHKLSNPLQTFAFPGDVPVNGRLLGGSSQDFNIMTRRGCWQAT EEEEECCCEEEECCCCCHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCEEEEECCCHHHH VSSVSSGQQLPASYGGLIYIVKGEWLICHTETHQLKAQQGCWWLPTIKAGQLQPLAADSH HHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCEEHHCCCCEECCCCCCCCCCEEECCCE LLWVTLVPGR EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA