| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596219
Identifier: 51596219
GI number: 51596219
Start: 2229079
End: 2229933
Strand: Direct
Name: 51596219
Synonym: YPTB1887
Alternate gene names: NA
Gene position: 2229079-2229933 (Clockwise)
Preceding gene: 51596218
Following gene: 51596220
Centisome position: 46.98
GC content: 37.54
Gene sequence:
>855_bases ATGTCGATGCTGATCGCTGATATCTATAATGATACACTTTATTATCCTCTAAGTGAATCAGAGTATATTGTATTCTTCTG TGCTTCTGAGCGAAATGCCAGAATTTATAAAAAGCTGAGATCAAATCCGCAAGATATTATCGATTCCCTTGCGAAAACTA TTAGTCAAGAATTAAAGTTCGAACCGCCAGCGCCTTACCTGACTGTATCTGACATTAGGGTGATTAATGATAATGTTAAC AATTTACACGCCAATATTGACCAGATTTTTTCTAATGTCTGGTGCCCGTTCGCGGATAGAAGAAAGCACTGGTTTCATTC TTTCACGCGACTTGCTAGTGAACCGAGTTCAGAAGAGTCCATCAGTGTAGTGCTTTCACATTTTCTTGAAAATTATCATG TACTGGAAATGGAGGGCCTCTATATGTTAATCGATAATGCTGATGTGGCAACAGACCGTGATCTATCTCGTCAGACACTA TTATTTTTTGAGCTAATTCGCCAGCAGTTAAATCCAAAAGTTCTTGATGGTATTCAGCAGAGAAACTGGCGTTTCAGACT TGGCGAAGAAGAGCTTTATCTACTCGTATTTTCAAACCATTATCCAAAGAACCATTCCCGCTATATCCCAGTAAAAAACA GTATTGCCTTCTTGATCCAACCAGACCGGGTTTTCGATAAATTCGCCAATGCAGAAACGATGTTGATCAAACAAAACGTC AGACAACAAATAAGAACCATCTATTGTTTACAGGGGGTCGAATACAATTATTCGTTATCAGAATCTAACGATCATAAAAG AAAATTTGTTAAGTCAACGGATTTACAATCAATAATTAAATGGTGGGATTTTTGA
Upstream 100 bases:
>100_bases TCATCCCATATCTTCATGAGGAAAACATTGAGCTATTTAAATCCTCTGGATTTAATTCTGTCGAAATATGTTTTTCATTC CTTAATTTTAGAGGGTATTT
Downstream 100 bases:
>100_bases TGATACCAATAACTGAAAGTACAAGTATTGATTTTGACACAATATCTTATCCAGATTTTTTGGGGGTTCTGGGAGTTGAT AATACGCCTCCTGGTGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSMLIADIYNDTLYYPLSESEYIVFFCASERNARIYKKLRSNPQDIIDSLAKTISQELKFEPPAPYLTVSDIRVINDNVN NLHANIDQIFSNVWCPFADRRKHWFHSFTRLASEPSSEESISVVLSHFLENYHVLEMEGLYMLIDNADVATDRDLSRQTL LFFELIRQQLNPKVLDGIQQRNWRFRLGEEELYLLVFSNHYPKNHSRYIPVKNSIAFLIQPDRVFDKFANAETMLIKQNV RQQIRTIYCLQGVEYNYSLSESNDHKRKFVKSTDLQSIIKWWDF
Sequences:
>Translated_284_residues MSMLIADIYNDTLYYPLSESEYIVFFCASERNARIYKKLRSNPQDIIDSLAKTISQELKFEPPAPYLTVSDIRVINDNVN NLHANIDQIFSNVWCPFADRRKHWFHSFTRLASEPSSEESISVVLSHFLENYHVLEMEGLYMLIDNADVATDRDLSRQTL LFFELIRQQLNPKVLDGIQQRNWRFRLGEEELYLLVFSNHYPKNHSRYIPVKNSIAFLIQPDRVFDKFANAETMLIKQNV RQQIRTIYCLQGVEYNYSLSESNDHKRKFVKSTDLQSIIKWWDF >Mature_283_residues SMLIADIYNDTLYYPLSESEYIVFFCASERNARIYKKLRSNPQDIIDSLAKTISQELKFEPPAPYLTVSDIRVINDNVNN LHANIDQIFSNVWCPFADRRKHWFHSFTRLASEPSSEESISVVLSHFLENYHVLEMEGLYMLIDNADVATDRDLSRQTLL FFELIRQQLNPKVLDGIQQRNWRFRLGEEELYLLVFSNHYPKNHSRYIPVKNSIAFLIQPDRVFDKFANAETMLIKQNVR QQIRTIYCLQGVEYNYSLSESNDHKRKFVKSTDLQSIIKWWDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33654; Mature: 33522
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLIADIYNDTLYYPLSESEYIVFFCASERNARIYKKLRSNPQDIIDSLAKTISQELKF CCEEEEEHHCCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC EPPAPYLTVSDIRVINDNVNNLHANIDQIFSNVWCPFADRRKHWFHSFTRLASEPSSEES CCCCCEEEECCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHH ISVVLSHFLENYHVLEMEGLYMLIDNADVATDRDLSRQTLLFFELIRQQLNPKVLDGIQQ HHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH RNWRFRLGEEELYLLVFSNHYPKNHSRYIPVKNSIAFLIQPDRVFDKFANAETMLIKQNV CCCEEEECCCEEEEEEEECCCCCCCCEEEEECCCEEEEEECHHHHHHHCCCHHHHHHHHH RQQIRTIYCLQGVEYNYSLSESNDHKRKFVKSTDLQSIIKWWDF HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure SMLIADIYNDTLYYPLSESEYIVFFCASERNARIYKKLRSNPQDIIDSLAKTISQELKF CEEEEEHHCCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC EPPAPYLTVSDIRVINDNVNNLHANIDQIFSNVWCPFADRRKHWFHSFTRLASEPSSEES CCCCCEEEECCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHH ISVVLSHFLENYHVLEMEGLYMLIDNADVATDRDLSRQTLLFFELIRQQLNPKVLDGIQQ HHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH RNWRFRLGEEELYLLVFSNHYPKNHSRYIPVKNSIAFLIQPDRVFDKFANAETMLIKQNV CCCEEEECCCEEEEEEEECCCCCCCCEEEEECCCEEEEEECHHHHHHHCCCHHHHHHHHH RQQIRTIYCLQGVEYNYSLSESNDHKRKFVKSTDLQSIIKWWDF HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA