| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596134
Identifier: 51596134
GI number: 51596134
Start: 2146493
End: 2148238
Strand: Direct
Name: 51596134
Synonym: YPTB1799
Alternate gene names: NA
Gene position: 2146493-2148238 (Clockwise)
Preceding gene: 51596133
Following gene: 51596135
Centisome position: 45.24
GC content: 52.12
Gene sequence:
>1746_bases ATGAAAGAGATCATCGTAGATAATTTTGCTGGTGGCGGTGGGGCTTCTACCGGGATCGAAATGGCAACCGGGCGCAGTGT TGATATCGCCATCAATCATGATCCGAATGCTATCGCCATGCACACCACCAATCACCCCGACACCCTGCATTATTGTGAGT CAGTATTCGATATTGACCCCGTGGCCGCGACCGCCGGCAGACCTGTCGGACTTGCATGGTTCAGCCCTGATTGCCGCCAT TTCAGTAAGGCGAAGGGCAGTAAGCCAGTTAAAAAAGAGATCCGTGGTTTAGCGTGGATACTGATTCGTTGGGGGTTAGC GAAAAAGCCTCGAGTAGTGATGCTGGAAAATGTGGAAGAGTTTAAAACGTGGGGACCGCTACTGACTGCCGAAGATGGCA CAGAACACCCCGATCCCGCCCGCGCGGGTGAGACATTCGCCGCATTTGTAGCGATGCTGACTACGGGTATTGATGCCGAA CATCCAGCGTTACAGGAGTGCTGCGAGGTTTTAGGGATTGATATCAATAGTATAGATGCTAAACGACTGCAGGCTGGTTT GGGATACGTCGTTGATCACAAAGAACTTCGGGCCAGTGATTATGGTGCGCCAACCATCAGAAAGCGCTTCTTTATGGTAA TGCGTTGTGATGGTTTGCCAGTAGTGTGGCCGGAGCCGACTCACGGCGATCCAAAATTATTGGAAGTTCAGAGCGGACAC CGTAAACCGTGGCGCACCGCCGCCGAGTGTATTGATTGGTCAATTCCTTGCCCGAGTATTTTCGATCGCAAGAAACCGCT AGCGGAGAACACCCTCAAACGCATTGCGCGGGGCATTCAACGTTTCGTTATGGATAACCCCACGCCGTTTATCGTGAAGT GTAACCACACCAGCAGTAAAACTACATATGACTGTTTCCGGGGGCAGCCATTAATTGATCCGTTGCAGGCCATTACCAAA ACGCCTGGCTTCTCATTGGTCACTCCAATCATAGCCCGTATCGGTCAAACCGGTTTTGGTGGCGATCGTATGGCGTATGA AGTGGGTAAACCACTAACGACAATCACTAGTAAGGCTGAACACCTTCTTGTCGCCCCGATCATTGCTCGTGAGTTTGGTA ATAGTGTGGGGCATGTGGTTGATGATCCAAGCGGTACTATTACAGCGGGTGGAGGTGGCAAGTCTCGGCTTGTTTCTGCA TTCCTGGCTAAACACTTCGGCGGCAACTATACCGGCTCAGGCGCTGATCTGAATCAGCCAGCCCACACAGTGACAACGGT TGATCATCATGCGTTGGTGACTTCTAACCTGATAAAGCTGCGCGGCACTTGCAAAGACGGTCAGCAGGTTACCCAGCCAA TGCCAACAATCACTGCCGGTGGTCTGCATATCGGTGAGGTTCGTGCTTTCTTACTCAAGTATTACGGCAATGAGAAAGAG GGTGTTAGCCTGAATGGCCCCCTGCACACAGTGACCACCAATGACCGGTTCGGTCTGGTGACGGTCGAGGGCATTGATTA TCAGATTGTGGATATCGGTATGCGTATGTTGCAGCCGCATGAGCTTTACGCCGCGCAGGGTTTCCCGAACTGGTACATCA TCGACCGCGATTACACCGGTACTAAATACGCCAAAGATAAGCAGGTAGCCCGCTGTGGTAATGCGGTGCCACCGCCATTT GCGGAAGCGCTGGTTCGGGCCAATCTGCCAGAAATGTGTGTAGATCGCGATGAGGTGGCGGCATGA
Upstream 100 bases:
>100_bases AAATCTTAGGCAATATCAACCGTATGAAATTAGACGGTATTCCGTCTGATGCCATCATTGCCGCCGCCACAACACTCACC GCCGCTATGGGAGCAACATC
Downstream 100 bases:
>100_bases CAACAGCACCGCGAACTAAGTCCCCGAGAAAGAAAAAGACTGAAGTATTGGGCGTGCTGTTACCTGGGGGTGGAATCAAG TACGCCACTGACCATGATCG
Product: modification methylase
Products: NA
Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; Cytosine-Specific Methylase; DNA Cytosine-Specific Methylase; C-5 Cytosine-Specific DNA Methylase Superfamily; Prophage LambdaSo Type II DNA Methyltransferase; Type II Restriction- System DNA Cytosine-Specific Methylase; Prophage DNA Cytosine Methylase; DNA Methyltransferase; DNA Methylase; DNA Cytosine Methyltransferase Family Protein
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MKEIIVDNFAGGGGASTGIEMATGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDPVAATAGRPVGLAWFSPDCRH FSKAKGSKPVKKEIRGLAWILIRWGLAKKPRVVMLENVEEFKTWGPLLTAEDGTEHPDPARAGETFAAFVAMLTTGIDAE HPALQECCEVLGIDINSIDAKRLQAGLGYVVDHKELRASDYGAPTIRKRFFMVMRCDGLPVVWPEPTHGDPKLLEVQSGH RKPWRTAAECIDWSIPCPSIFDRKKPLAENTLKRIARGIQRFVMDNPTPFIVKCNHTSSKTTYDCFRGQPLIDPLQAITK TPGFSLVTPIIARIGQTGFGGDRMAYEVGKPLTTITSKAEHLLVAPIIAREFGNSVGHVVDDPSGTITAGGGGKSRLVSA FLAKHFGGNYTGSGADLNQPAHTVTTVDHHALVTSNLIKLRGTCKDGQQVTQPMPTITAGGLHIGEVRAFLLKYYGNEKE GVSLNGPLHTVTTNDRFGLVTVEGIDYQIVDIGMRMLQPHELYAAQGFPNWYIIDRDYTGTKYAKDKQVARCGNAVPPPF AEALVRANLPEMCVDRDEVAA
Sequences:
>Translated_581_residues MKEIIVDNFAGGGGASTGIEMATGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDPVAATAGRPVGLAWFSPDCRH FSKAKGSKPVKKEIRGLAWILIRWGLAKKPRVVMLENVEEFKTWGPLLTAEDGTEHPDPARAGETFAAFVAMLTTGIDAE HPALQECCEVLGIDINSIDAKRLQAGLGYVVDHKELRASDYGAPTIRKRFFMVMRCDGLPVVWPEPTHGDPKLLEVQSGH RKPWRTAAECIDWSIPCPSIFDRKKPLAENTLKRIARGIQRFVMDNPTPFIVKCNHTSSKTTYDCFRGQPLIDPLQAITK TPGFSLVTPIIARIGQTGFGGDRMAYEVGKPLTTITSKAEHLLVAPIIAREFGNSVGHVVDDPSGTITAGGGGKSRLVSA FLAKHFGGNYTGSGADLNQPAHTVTTVDHHALVTSNLIKLRGTCKDGQQVTQPMPTITAGGLHIGEVRAFLLKYYGNEKE GVSLNGPLHTVTTNDRFGLVTVEGIDYQIVDIGMRMLQPHELYAAQGFPNWYIIDRDYTGTKYAKDKQVARCGNAVPPPF AEALVRANLPEMCVDRDEVAA >Mature_581_residues MKEIIVDNFAGGGGASTGIEMATGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDPVAATAGRPVGLAWFSPDCRH FSKAKGSKPVKKEIRGLAWILIRWGLAKKPRVVMLENVEEFKTWGPLLTAEDGTEHPDPARAGETFAAFVAMLTTGIDAE HPALQECCEVLGIDINSIDAKRLQAGLGYVVDHKELRASDYGAPTIRKRFFMVMRCDGLPVVWPEPTHGDPKLLEVQSGH RKPWRTAAECIDWSIPCPSIFDRKKPLAENTLKRIARGIQRFVMDNPTPFIVKCNHTSSKTTYDCFRGQPLIDPLQAITK TPGFSLVTPIIARIGQTGFGGDRMAYEVGKPLTTITSKAEHLLVAPIIAREFGNSVGHVVDDPSGTITAGGGGKSRLVSA FLAKHFGGNYTGSGADLNQPAHTVTTVDHHALVTSNLIKLRGTCKDGQQVTQPMPTITAGGLHIGEVRAFLLKYYGNEKE GVSLNGPLHTVTTNDRFGLVTVEGIDYQIVDIGMRMLQPHELYAAQGFPNWYIIDRDYTGTKYAKDKQVARCGNAVPPPF AEALVRANLPEMCVDRDEVAA
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63292; Mature: 63292
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIIVDNFAGGGGASTGIEMATGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDP CCCEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCC VAATAGRPVGLAWFSPDCRHFSKAKGSKPVKKEIRGLAWILIRWGLAKKPRVVMLENVEE HHHCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHEEEHHHCCCCCCCEEEECCHHH FKTWGPLLTAEDGTEHPDPARAGETFAAFVAMLTTGIDAEHPALQECCEVLGIDINSIDA HHHCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCH KRLQAGLGYVVDHKELRASDYGAPTIRKRFFMVMRCDGLPVVWPEPTHGDPKLLEVQSGH HHHHHCCCEEECHHHHHCCCCCCHHHHHHEEEEEEECCCEEECCCCCCCCCCEEEECCCC RKPWRTAAECIDWSIPCPSIFDRKKPLAENTLKRIARGIQRFVMDNPTPFIVKCNHTSSK CCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC TTYDCFRGQPLIDPLQAITKTPGFSLVTPIIARIGQTGFGGDRMAYEVGKPLTTITSKAE CCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHCCCC HLLVAPIIAREFGNSVGHVVDDPSGTITAGGGGKSRLVSAFLAKHFGGNYTGSGADLNQP CEEEHHHHHHHHCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC AHTVTTVDHHALVTSNLIKLRGTCKDGQQVTQPMPTITAGGLHIGEVRAFLLKYYGNEKE CCEEEECCHHHHHHHHHHEEECCCCCCHHHHCCCCCEEECCEEHHHHHHHHHHHHCCCCC GVSLNGPLHTVTTNDRFGLVTVEGIDYQIVDIGMRMLQPHELYAAQGFPNWYIIDRDYTG CEEECCCEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCHHHHEECCCCCEEEEECCCCC TKYAKDKQVARCGNAVPPPFAEALVRANLPEMCVDRDEVAA CCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCHHHHCC >Mature Secondary Structure MKEIIVDNFAGGGGASTGIEMATGRSVDIAINHDPNAIAMHTTNHPDTLHYCESVFDIDP CCCEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCC VAATAGRPVGLAWFSPDCRHFSKAKGSKPVKKEIRGLAWILIRWGLAKKPRVVMLENVEE HHHCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHEEEHHHCCCCCCCEEEECCHHH FKTWGPLLTAEDGTEHPDPARAGETFAAFVAMLTTGIDAEHPALQECCEVLGIDINSIDA HHHCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCH KRLQAGLGYVVDHKELRASDYGAPTIRKRFFMVMRCDGLPVVWPEPTHGDPKLLEVQSGH HHHHHCCCEEECHHHHHCCCCCCHHHHHHEEEEEEECCCEEECCCCCCCCCCEEEECCCC RKPWRTAAECIDWSIPCPSIFDRKKPLAENTLKRIARGIQRFVMDNPTPFIVKCNHTSSK CCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC TTYDCFRGQPLIDPLQAITKTPGFSLVTPIIARIGQTGFGGDRMAYEVGKPLTTITSKAE CCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHCCCC HLLVAPIIAREFGNSVGHVVDDPSGTITAGGGGKSRLVSAFLAKHFGGNYTGSGADLNQP CEEEHHHHHHHHCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC AHTVTTVDHHALVTSNLIKLRGTCKDGQQVTQPMPTITAGGLHIGEVRAFLLKYYGNEKE CCEEEECCHHHHHHHHHHEEECCCCCCHHHHCCCCCEEECCEEHHHHHHHHHHHHCCCCC GVSLNGPLHTVTTNDRFGLVTVEGIDYQIVDIGMRMLQPHELYAAQGFPNWYIIDRDYTG CEEECCCEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCHHHHEECCCCCEEEEECCCCC TKYAKDKQVARCGNAVPPPFAEALVRANLPEMCVDRDEVAA CCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA