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The map label for this gene is yfdM

Identifier: 51596133

GI number: 51596133

Start: 2145621

End: 2146496

Strand: Direct

Name: yfdM

Synonym: YPTB1798

Alternate gene names: 51596133

Gene position: 2145621-2146496 (Clockwise)

Preceding gene: 51596132

Following gene: 51596134

Centisome position: 45.22

GC content: 50.0

Gene sequence:

>876_bases
ATGATTGATTTCTCCAATACCCAATATGTTCATGATCTGGCCGCTCTCAAGTCCGCCCCAACACATAAGTTGAAATTAAT
TGGCGACCAGTGGCGCACGCCAGATGCTTTGTTTTGGGGTATCAATGCGATGTTTGGCCCGTTAGTTCTGGATCTGTTCA
GTGATTGCGAGAATGCGAAAACACCCGCTTATTACACTGCGGAAGATAACTCGCTCACTCAAGACTGGGCTACGAAACTG
ACCGAGTTGAATGGCGCTGCATTTGCTAACCCTCCCTACAGCACGGCGAAAAAGCATGAAGGGCAATATATCACTGGCAT
GCGGCACATCATGGCTTATACCTCCGAAATGCGGCAGCGCGGCGGTCGCTATGTCTATTTGACCAAAGCGGCAACGTCAG
AGGTGTGGTGGCCTGAAGAAGCAGACCATATTGCATTCATTCGCGGCAGAATTGGCTTTGAAGTACCGGCTTGGTTCCGT
CCCGAAGATAACACTCAAGTTGCCTGCAATGCGGGTTTTGGTGCGGCTATTGCCATTTTCGATAAGGAATGGCGTGGCCC
TGCGATTAGCTATATCACCCGTGAGCAATTACTTGCCACTGGTGAGGCATTTTTAGCGCAGATCCGCAGAGAGGCTGAGC
GCCTGATACCACAAAACCAGCCGAAAAATATTCCAGTACCGGAAACTGGCAACACCGTCTGGCCGGTCGAAGTAAATCTG
TATTTCAGCAAAATATCGGGTGCCGCTGAATTACCCGCCGACCTGCAACATAAAATCTTAGGCAATATCAACCGTATGAA
ATTAGACGGTATTCCGTCTGATGCCATCATTGCCGCCGCCACAACACTCACCGCCGCTATGGGAGCAACATCATGA

Upstream 100 bases:

>100_bases
AAGCTATTCTTTGCGAATTGAACCCAGCATACGCTGAACTGGTTCCAGCTCGTATCGAAAGTATTTTATCTGCGTATCCA
ATTAATAAGGGGTGTGCAGC

Downstream 100 bases:

>100_bases
AAGAGATCATCGTAGATAATTTTGCTGGTGGCGGTGGGGCTTCTACCGGGATCGAAATGGCAACCGGGCGCAGTGTTGAT
ATCGCCATCAATCATGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIDFSNTQYVHDLAALKSAPTHKLKLIGDQWRTPDALFWGINAMFGPLVLDLFSDCENAKTPAYYTAEDNSLTQDWATKL
TELNGAAFANPPYSTAKKHEGQYITGMRHIMAYTSEMRQRGGRYVYLTKAATSEVWWPEEADHIAFIRGRIGFEVPAWFR
PEDNTQVACNAGFGAAIAIFDKEWRGPAISYITREQLLATGEAFLAQIRREAERLIPQNQPKNIPVPETGNTVWPVEVNL
YFSKISGAAELPADLQHKILGNINRMKLDGIPSDAIIAAATTLTAAMGATS

Sequences:

>Translated_291_residues
MIDFSNTQYVHDLAALKSAPTHKLKLIGDQWRTPDALFWGINAMFGPLVLDLFSDCENAKTPAYYTAEDNSLTQDWATKL
TELNGAAFANPPYSTAKKHEGQYITGMRHIMAYTSEMRQRGGRYVYLTKAATSEVWWPEEADHIAFIRGRIGFEVPAWFR
PEDNTQVACNAGFGAAIAIFDKEWRGPAISYITREQLLATGEAFLAQIRREAERLIPQNQPKNIPVPETGNTVWPVEVNL
YFSKISGAAELPADLQHKILGNINRMKLDGIPSDAIIAAATTLTAAMGATS
>Mature_291_residues
MIDFSNTQYVHDLAALKSAPTHKLKLIGDQWRTPDALFWGINAMFGPLVLDLFSDCENAKTPAYYTAEDNSLTQDWATKL
TELNGAAFANPPYSTAKKHEGQYITGMRHIMAYTSEMRQRGGRYVYLTKAATSEVWWPEEADHIAFIRGRIGFEVPAWFR
PEDNTQVACNAGFGAAIAIFDKEWRGPAISYITREQLLATGEAFLAQIRREAERLIPQNQPKNIPVPETGNTVWPVEVNL
YFSKISGAAELPADLQHKILGNINRMKLDGIPSDAIIAAATTLTAAMGATS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008593 [H]

Pfam domain/function: PF05869 Dam [H]

EC number: NA

Molecular weight: Translated: 32282; Mature: 32282

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFSNTQYVHDLAALKSAPTHKLKLIGDQWRTPDALFWGINAMFGPLVLDLFSDCENAK
CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TPAYYTAEDNSLTQDWATKLTELNGAAFANPPYSTAKKHEGQYITGMRHIMAYTSEMRQR
CCEEEECCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHC
GGRYVYLTKAATSEVWWPEEADHIAFIRGRIGFEVPAWFRPEDNTQVACNAGFGAAIAIF
CCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCEEEEECCCCEEEEEE
DKEWRGPAISYITREQLLATGEAFLAQIRREAERLIPQNQPKNIPVPETGNTVWPVEVNL
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE
YFSKISGAAELPADLQHKILGNINRMKLDGIPSDAIIAAATTLTAAMGATS
EEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDFSNTQYVHDLAALKSAPTHKLKLIGDQWRTPDALFWGINAMFGPLVLDLFSDCENAK
CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TPAYYTAEDNSLTQDWATKLTELNGAAFANPPYSTAKKHEGQYITGMRHIMAYTSEMRQR
CCEEEECCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHC
GGRYVYLTKAATSEVWWPEEADHIAFIRGRIGFEVPAWFRPEDNTQVACNAGFGAAIAIF
CCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCEEEEECCCCEEEEEE
DKEWRGPAISYITREQLLATGEAFLAQIRREAERLIPQNQPKNIPVPETGNTVWPVEVNL
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEE
YFSKISGAAELPADLQHKILGNINRMKLDGIPSDAIIAAATTLTAAMGATS
EEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 3532033 [H]