| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is hisC
Identifier: 51595897
GI number: 51595897
Start: 1877748
End: 1878896
Strand: Reverse
Name: hisC
Synonym: YPTB1560
Alternate gene names: 51595897
Gene position: 1878896-1877748 (Counterclockwise)
Preceding gene: 51595898
Following gene: 51595896
Centisome position: 39.6
GC content: 52.05
Gene sequence:
>1149_bases ATGAGCCAATCTAATAACGTCACGGACCTGGCCCGTGCCAACATCCGTGCTCTGACTCCCTATATGTCCGCACGTCGGTT AGGCGGTAATGGCGATGTCTGGCTGAATGCCAACGAATATCCGCTGGGCACTGAATATCAGTTGACCACGCAAACCTTCA ATCGCTATCCCGAGTGTCAGCCTAAGCACGTTATTGAGCGCTATGCCGCTTACGCCGGTTTACCGCCAGAGCAAGTACTG GTTAGTCGTGGTGCTGATGAAGGGATCGAACTGCTGATCCGCGCGTTCTGTGAGCCGGGTCAGGATGCCATTTTATTCTG CCCACCAACCTACGGTATGTACGCTGTCAGCGCTGAAACCTTTGGTGTAGAACGGCGCACCGTACCCGCTCAGGCTGACT GGCAGTTAGATTTACCGGCCATTGCCAACAATCTGGATCAGGTAAAAGTGATCTATGTTTGCAGCCCAAATAACCCGACG GGTAATTTAATCAACCCGGCTGATTTACAGGCGGTGCTGGCACTGGCGCAAGGCCGCGCGATTGTCGCCATCGACGAAGC CTATATTGAGTTTTGTCCACAAGCATCGGTCAGTAATTGGCTAAAAGATTATCCGAATTTAGTGATTTTGCGCACCTTAT CGAAAGCCTTTGCATTAGCGGGTTTACGTTGTGGCTTTACGTTAGCCAACAGCGATATCATCCAATTGCTGCTTAAAGTG ATCGCCCCCTATCCGTTATCTACGCCAGTGGCGGATATTGCCGCGCAAGCACTCAGCCCAAAGGGGATTGAGCAAATGCG CCAACGGGTCAGTGAAGTACGAGCTAACCGCGCATGGCTACAATCCGCACTGCAAGATTGCGCCTGTGTCGAACAGGTGT TCACCAGCGAAAGCAACTATTTGCTGGCCCGCTTTACCGCGTCCAGCAGCGTATTCAACGCATTGTGGGATCAGGGCATT ATTTTGCGTGATCAAAATAAACAACCGGGGTTAGCCAACTGCCTGCGCATCACCATTGGCACCCGTCAGGAGTGTGAGCG AGTGATTGCCGCCCTTGCCCCCCTGCCCGGCATTGATAACTCGAATAACATTGATAACCAGAGTAAAACCCATTCTCAGA CCTCCAGCATCCGTAAGGGAACGATATGA
Upstream 100 bases:
>100_bases CACTGGCACAGGCCGAACAACTGACCGCACACAAAAATGCAGTTACCCTGCGCGTTACCGCCTTGAATAACGCCCTGACC GCCGTGAATAAGGAGTAAGC
Downstream 100 bases:
>100_bases GCCAGAAATTTCTTTTTATTGACCGCGACGGCACCATCATTGCCGAGCCACCAACTGATTATCAGGTTGACCGGTTGGAT AAACTGGCGCTGGAGCCTGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVL VSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLDQVKVIYVCSPNNPT GNLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV IAPYPLSTPVADIAAQALSPKGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLARFTASSSVFNALWDQGI ILRDQNKQPGLANCLRITIGTRQECERVIAALAPLPGIDNSNNIDNQSKTHSQTSSIRKGTI
Sequences:
>Translated_382_residues MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVL VSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLDQVKVIYVCSPNNPT GNLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV IAPYPLSTPVADIAAQALSPKGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLARFTASSSVFNALWDQGI ILRDQNKQPGLANCLRITIGTRQECERVIAALAPLPGIDNSNNIDNQSKTHSQTSSIRKGTI >Mature_381_residues SQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVLV SRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLDQVKVIYVCSPNNPTG NLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKVI APYPLSTPVADIAAQALSPKGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLARFTASSSVFNALWDQGII LRDQNKQPGLANCLRITIGTRQECERVIAALAPLPGIDNSNNIDNQSKTHSQTSSIRKGTI
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=347, Percent_Identity=74.3515850144092, Blast_Score=549, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322075, Length=368, Percent_Identity=31.7934782608696, Blast_Score=170, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41889; Mature: 41758
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQ CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHCCCCCC PKHVIERYAAYAGLPPEQVLVSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAET HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHH FGVERRTVPAQADWQLDLPAIANNLDQVKVIYVCSPNNPTGNLINPADLQAVLALAQGRA HCCCCCCCCCCCCCEEECHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCE IVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV EEEECHHHHHHCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEECCHHHHHHHHHH IAPYPLSTPVADIAAQALSPKGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNY HCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LLARFTASSSVFNALWDQGIILRDQNKQPGLANCLRITIGTRQECERVIAALAPLPGIDN EEEEEECHHHHHHHHHCCCEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHHCCCCCCCC SNNIDNQSKTHSQTSSIRKGTI CCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQ CCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHCCCCCC PKHVIERYAAYAGLPPEQVLVSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAET HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHH FGVERRTVPAQADWQLDLPAIANNLDQVKVIYVCSPNNPTGNLINPADLQAVLALAQGRA HCCCCCCCCCCCCCEEECHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCE IVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKV EEEECHHHHHHCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCEEECCHHHHHHHHHH IAPYPLSTPVADIAAQALSPKGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNY HCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LLARFTASSSVFNALWDQGIILRDQNKQPGLANCLRITIGTRQECERVIAALAPLPGIDN EEEEEECHHHHHHHHHCCCEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHHCCCCCCCC SNNIDNQSKTHSQTSSIRKGTI CCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA